Protein–RNA interactions for Protein: Q96MT7

CFAP44, Cilia- and flagella-associated protein 44, humanhuman

Predictions only

Length 982 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP44Q96MT7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC27.29■■□□□ 1.96
CFAP44Q96MT7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP44Q96MT7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CFAP44Q96MT7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC27.28■■□□□ 1.96
CFAP44Q96MT7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
CFAP44Q96MT7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CFAP44Q96MT7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 MDK-213ENST00000617138 635 ntTSL 2 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CFAP44Q96MT7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP44Q96MT7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC27.26■■□□□ 1.95
CFAP44Q96MT7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC27.26■■□□□ 1.95
CFAP44Q96MT7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP44Q96MT7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP44Q96MT7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC27.26■■□□□ 1.95
CFAP44Q96MT7 CNN2P6-201ENST00000439038 900 ntBASIC27.26■■□□□ 1.95
CFAP44Q96MT7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP44Q96MT7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC27.26■■□□□ 1.95
CFAP44Q96MT7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
CFAP44Q96MT7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 AC026185.1-201ENST00000445748 174 ntBASIC27.25■■□□□ 1.95
CFAP44Q96MT7 TERF1P5-201ENST00000477545 1207 ntBASIC27.25■■□□□ 1.95
CFAP44Q96MT7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP44Q96MT7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 BID-212ENST00000614949 1988 ntTSL 5 BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 AC231657.2-201ENST00000624556 255 ntBASIC27.24■■□□□ 1.95
CFAP44Q96MT7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 RBM17P2-201ENST00000616397 1405 ntBASIC27.24■■□□□ 1.95
CFAP44Q96MT7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
CFAP44Q96MT7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC27.23■■□□□ 1.95
CFAP44Q96MT7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFAP44Q96MT7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
CFAP44Q96MT7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC27.23■■□□□ 1.95
CFAP44Q96MT7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.23■■□□□ 1.95
CFAP44Q96MT7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC27.23■■□□□ 1.95
CFAP44Q96MT7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFAP44Q96MT7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFAP44Q96MT7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 CROCCP5-201ENST00000436658 830 ntBASIC27.22■■□□□ 1.95
CFAP44Q96MT7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 AC243732.1-201ENST00000612648 864 ntBASIC27.22■■□□□ 1.95
CFAP44Q96MT7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFAP44Q96MT7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP44Q96MT7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP44Q96MT7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP44Q96MT7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
CFAP44Q96MT7 LINC00565-201ENST00000562710 2331 ntBASIC27.21■■□□□ 1.95
CFAP44Q96MT7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
CFAP44Q96MT7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
CFAP44Q96MT7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms