Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00479Q96M42 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00479Q96M42 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00479Q96M42 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00479Q96M42 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LINC00479Q96M42 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC00479Q96M42 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00479Q96M42 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00479Q96M42 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC00479Q96M42 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
LINC00479Q96M42 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC00479Q96M42 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC00479Q96M42 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC00479Q96M42 AC006455.2-201ENST00000429931 906 ntBASIC15.98■□□□□ 0.15
LINC00479Q96M42 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LINC00479Q96M42 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC00479Q96M42 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC00479Q96M42 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.98■□□□□ 0.15
LINC00479Q96M42 pRNA.6-201ENST00000610482 90 ntBASIC15.98■□□□□ 0.15
LINC00479Q96M42 pRNA.5-201ENST00000612139 90 ntBASIC15.98■□□□□ 0.15
LINC00479Q96M42 pRNA.11-201ENST00000618423 90 ntBASIC15.98■□□□□ 0.15
LINC00479Q96M42 pRNA.13-201ENST00000619112 90 ntBASIC15.98■□□□□ 0.15
LINC00479Q96M42 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LINC00479Q96M42 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.98■□□□□ 0.15
LINC00479Q96M42 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC00479Q96M42 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC00479Q96M42 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC00479Q96M42 AC027702.1-201ENST00000563810 1770 ntBASIC15.98■□□□□ 0.15
LINC00479Q96M42 AC087289.5-201ENST00000586076 3175 ntBASIC15.97■□□□□ 0.15
LINC00479Q96M42 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 AC010997.5-201ENST00000609182 354 ntBASIC15.97■□□□□ 0.15
LINC00479Q96M42 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC00479Q96M42 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC00479Q96M42 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00479Q96M42 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00479Q96M42 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00479Q96M42 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.96■□□□□ 0.15
LINC00479Q96M42 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00479Q96M42 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC00479Q96M42 AL117332.1-201ENST00000622628 974 ntBASIC15.96■□□□□ 0.15
LINC00479Q96M42 AC241377.3-202ENST00000626088 1088 ntBASIC15.96■□□□□ 0.15
LINC00479Q96M42 AC241585.3-202ENST00000628937 1088 ntBASIC15.96■□□□□ 0.15
LINC00479Q96M42 AC245100.8-202ENST00000629247 1058 ntBASIC15.96■□□□□ 0.15
LINC00479Q96M42 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
LINC00479Q96M42 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00479Q96M42 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00479Q96M42 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00479Q96M42 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00479Q96M42 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC00479Q96M42 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC00479Q96M42 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
LINC00479Q96M42 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC00479Q96M42 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC00479Q96M42 KRT125P-201ENST00000546827 989 ntBASIC15.95■□□□□ 0.14
LINC00479Q96M42 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC00479Q96M42 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.95■□□□□ 0.14
LINC00479Q96M42 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 AC068587.7-201ENST00000641602 218 ntBASIC15.95■□□□□ 0.14
LINC00479Q96M42 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC00479Q96M42 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms