Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.62■□□□□ 0.41
TIMD4Q96H15 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMD4Q96H15 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TIMD4Q96H15 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TIMD4Q96H15 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMD4Q96H15 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMD4Q96H15 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TIMD4Q96H15 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMD4Q96H15 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMD4Q96H15 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMD4Q96H15 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMD4Q96H15 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMD4Q96H15 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMD4Q96H15 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMD4Q96H15 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMD4Q96H15 NCF1B-203ENST00000435988 1254 ntBASIC17.61■□□□□ 0.41
TIMD4Q96H15 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMD4Q96H15 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.61■□□□□ 0.41
TIMD4Q96H15 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.6■□□□□ 0.41
TIMD4Q96H15 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMD4Q96H15 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TIMD4Q96H15 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TIMD4Q96H15 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMD4Q96H15 SLC29A4P1-201ENST00000398760 971 ntBASIC17.6■□□□□ 0.41
TIMD4Q96H15 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMD4Q96H15 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.6■□□□□ 0.41
TIMD4Q96H15 AC007322.4-201ENST00000509611 723 ntBASIC17.6■□□□□ 0.41
TIMD4Q96H15 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.6■□□□□ 0.41
TIMD4Q96H15 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.6■□□□□ 0.41
TIMD4Q96H15 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMD4Q96H15 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TIMD4Q96H15 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMD4Q96H15 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TIMD4Q96H15 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 AC061975.6-201ENST00000579045 1553 ntBASIC17.59■□□□□ 0.41
TIMD4Q96H15 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.59■□□□□ 0.41
TIMD4Q96H15 AC245052.3-201ENST00000450182 901 ntBASIC17.59■□□□□ 0.41
TIMD4Q96H15 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.59■□□□□ 0.41
TIMD4Q96H15 AC069236.1-201ENST00000604339 616 ntBASIC17.59■□□□□ 0.41
TIMD4Q96H15 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.59■□□□□ 0.41
TIMD4Q96H15 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TIMD4Q96H15 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.59■□□□□ 0.41
TIMD4Q96H15 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMD4Q96H15 AC010542.4-201ENST00000563151 1910 ntBASIC17.59■□□□□ 0.41
TIMD4Q96H15 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TIMD4Q96H15 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.58■□□□□ 0.41
TIMD4Q96H15 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.58■□□□□ 0.41
TIMD4Q96H15 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TIMD4Q96H15 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TIMD4Q96H15 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TIMD4Q96H15 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.58■□□□□ 0.4
TIMD4Q96H15 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.58■□□□□ 0.4
TIMD4Q96H15 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TIMD4Q96H15 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
TIMD4Q96H15 CNN2P6-201ENST00000439038 900 ntBASIC17.58■□□□□ 0.4
TIMD4Q96H15 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.58■□□□□ 0.4
TIMD4Q96H15 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TIMD4Q96H15 AC068473.5-201ENST00000616428 2072 ntBASIC17.58■□□□□ 0.4
TIMD4Q96H15 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TIMD4Q96H15 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TIMD4Q96H15 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TIMD4Q96H15 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TIMD4Q96H15 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TIMD4Q96H15 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TIMD4Q96H15 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.57■□□□□ 0.4
TIMD4Q96H15 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMD4Q96H15 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TIMD4Q96H15 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TIMD4Q96H15 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMD4Q96H15 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TIMD4Q96H15 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.57■□□□□ 0.4
TIMD4Q96H15 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TIMD4Q96H15 AC083906.2-201ENST00000511578 360 ntBASIC17.57■□□□□ 0.4
TIMD4Q96H15 AF201337.1-201ENST00000520239 748 ntBASIC17.57■□□□□ 0.4
TIMD4Q96H15 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.57■□□□□ 0.4
TIMD4Q96H15 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.57■□□□□ 0.4
TIMD4Q96H15 AC104771.1-201ENST00000603335 964 ntBASIC17.57■□□□□ 0.4
TIMD4Q96H15 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms