Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN23Q96B33 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN23Q96B33 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN23Q96B33 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN23Q96B33 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN23Q96B33 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN23Q96B33 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.16■□□□□ 0.98
CLDN23Q96B33 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN23Q96B33 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN23Q96B33 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN23Q96B33 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN23Q96B33 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN23Q96B33 KRT18P68-201ENST00000392293 1000 ntBASIC21.15■□□□□ 0.98
CLDN23Q96B33 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.15■□□□□ 0.98
CLDN23Q96B33 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.15■□□□□ 0.98
CLDN23Q96B33 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.15■□□□□ 0.98
CLDN23Q96B33 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CLDN23Q96B33 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CLDN23Q96B33 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN23Q96B33 AC010331.1-201ENST00000611423 582 ntBASIC21.15■□□□□ 0.98
CLDN23Q96B33 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN23Q96B33 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN23Q96B33 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN23Q96B33 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN23Q96B33 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CLDN23Q96B33 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLDN23Q96B33 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN23Q96B33 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN23Q96B33 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN23Q96B33 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.14■□□□□ 0.97
CLDN23Q96B33 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.14■□□□□ 0.97
CLDN23Q96B33 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CLDN23Q96B33 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.14■□□□□ 0.97
CLDN23Q96B33 AC087742.1-201ENST00000575880 1738 ntBASIC21.14■□□□□ 0.97
CLDN23Q96B33 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN23Q96B33 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN23Q96B33 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN23Q96B33 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN23Q96B33 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 AC245052.3-201ENST00000450182 901 ntBASIC21.13■□□□□ 0.97
CLDN23Q96B33 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN23Q96B33 SOX15-203ENST00000570788 1093 ntBASIC21.13■□□□□ 0.97
CLDN23Q96B33 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN23Q96B33 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN23Q96B33 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.13■□□□□ 0.97
CLDN23Q96B33 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN23Q96B33 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN23Q96B33 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN23Q96B33 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN23Q96B33 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN23Q96B33 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN23Q96B33 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN23Q96B33 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN23Q96B33 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN23Q96B33 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN23Q96B33 AC012618.2-201ENST00000428058 849 ntBASIC21.12■□□□□ 0.97
CLDN23Q96B33 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN23Q96B33 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN23Q96B33 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.12■□□□□ 0.97
CLDN23Q96B33 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN23Q96B33 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CLDN23Q96B33 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN23Q96B33 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CLDN23Q96B33 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN23Q96B33 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN23Q96B33 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN23Q96B33 AC003102.1-202ENST00000563394 1796 ntBASIC21.11■□□□□ 0.97
CLDN23Q96B33 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN23Q96B33 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN23Q96B33 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.11■□□□□ 0.97
CLDN23Q96B33 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.11■□□□□ 0.97
CLDN23Q96B33 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.11■□□□□ 0.97
CLDN23Q96B33 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN23Q96B33 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN23Q96B33 BX088651.1-201ENST00000540551 451 ntBASIC21.11■□□□□ 0.97
CLDN23Q96B33 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CLDN23Q96B33 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN23Q96B33 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLDN23Q96B33 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN23Q96B33 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
CLDN23Q96B33 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.1■□□□□ 0.97
CLDN23Q96B33 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDN23Q96B33 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN23Q96B33 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN23Q96B33 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CLDN23Q96B33 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN23Q96B33 POM121L13P-201ENST00000422362 380 ntBASIC21.1■□□□□ 0.97
CLDN23Q96B33 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN23Q96B33 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.1■□□□□ 0.97
CLDN23Q96B33 AC233702.5-201ENST00000584107 538 ntBASIC21.1■□□□□ 0.97
CLDN23Q96B33 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms