Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGCDQ92629 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGCDQ92629 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SGCDQ92629 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCDQ92629 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCDQ92629 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCDQ92629 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SGCDQ92629 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCDQ92629 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.13■□□□□ 0.65
SGCDQ92629 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCDQ92629 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.13■□□□□ 0.65
SGCDQ92629 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.13■□□□□ 0.65
SGCDQ92629 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SGCDQ92629 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SGCDQ92629 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SGCDQ92629 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.13■□□□□ 0.65
SGCDQ92629 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SGCDQ92629 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.13■□□□□ 0.65
SGCDQ92629 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SGCDQ92629 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.13■□□□□ 0.65
SGCDQ92629 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.13■□□□□ 0.65
SGCDQ92629 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.13■□□□□ 0.65
SGCDQ92629 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.12■□□□□ 0.65
SGCDQ92629 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SGCDQ92629 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SGCDQ92629 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCDQ92629 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.12■□□□□ 0.65
SGCDQ92629 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCDQ92629 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.12■□□□□ 0.65
SGCDQ92629 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCDQ92629 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SGCDQ92629 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SGCDQ92629 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCDQ92629 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCDQ92629 AL031602.1-201ENST00000633169 911 ntBASIC19.12■□□□□ 0.65
SGCDQ92629 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCDQ92629 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SGCDQ92629 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.12■□□□□ 0.65
SGCDQ92629 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SGCDQ92629 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGCDQ92629 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.11■□□□□ 0.65
SGCDQ92629 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGCDQ92629 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.11■□□□□ 0.65
SGCDQ92629 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
SGCDQ92629 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SGCDQ92629 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.11■□□□□ 0.65
SGCDQ92629 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.11■□□□□ 0.65
SGCDQ92629 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.11■□□□□ 0.65
SGCDQ92629 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.11■□□□□ 0.65
SGCDQ92629 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.11■□□□□ 0.65
SGCDQ92629 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.11■□□□□ 0.65
SGCDQ92629 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.11■□□□□ 0.65
SGCDQ92629 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGCDQ92629 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGCDQ92629 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGCDQ92629 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SGCDQ92629 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.1■□□□□ 0.65
SGCDQ92629 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGCDQ92629 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SGCDQ92629 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGCDQ92629 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.1■□□□□ 0.65
SGCDQ92629 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.1■□□□□ 0.65
SGCDQ92629 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGCDQ92629 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.1■□□□□ 0.65
SGCDQ92629 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.1■□□□□ 0.65
SGCDQ92629 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.1■□□□□ 0.65
SGCDQ92629 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.1■□□□□ 0.65
SGCDQ92629 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SGCDQ92629 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SGCDQ92629 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.1■□□□□ 0.65
SGCDQ92629 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.1■□□□□ 0.65
SGCDQ92629 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SGCDQ92629 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SGCDQ92629 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SGCDQ92629 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SGCDQ92629 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SGCDQ92629 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SGCDQ92629 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SGCDQ92629 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SGCDQ92629 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
SGCDQ92629 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SGCDQ92629 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.09■□□□□ 0.65
SGCDQ92629 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SGCDQ92629 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.09■□□□□ 0.65
SGCDQ92629 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.09■□□□□ 0.65
SGCDQ92629 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.09■□□□□ 0.65
SGCDQ92629 BHLHE23-202ENST00000612929 1109 ntBASIC19.09■□□□□ 0.65
SGCDQ92629 MIR6722-201ENST00000617286 78 ntBASIC19.09■□□□□ 0.65
SGCDQ92629 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.09■□□□□ 0.65
SGCDQ92629 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SGCDQ92629 AC020907.5-201ENST00000624372 1936 ntBASIC19.09■□□□□ 0.65
SGCDQ92629 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SGCDQ92629 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SGCDQ92629 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SGCDQ92629 AL512408.1-201ENST00000569378 2000 ntBASIC19.08■□□□□ 0.65
SGCDQ92629 AC098818.2-201ENST00000564925 2320 ntBASIC19.08■□□□□ 0.65
SGCDQ92629 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SGCDQ92629 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SGCDQ92629 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.08■□□□□ 0.65
SGCDQ92629 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms