Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ATL1Q8WXF7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATL1Q8WXF7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 AC008175.2-201ENST00000612840 297 ntBASIC20.42■□□□□ 0.86
ATL1Q8WXF7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATL1Q8WXF7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 POU5F1P4-201ENST00000413175 1085 ntBASIC20.41■□□□□ 0.86
ATL1Q8WXF7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 CCDC92B-201ENST00000575506 885 ntBASIC20.41■□□□□ 0.86
ATL1Q8WXF7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATL1Q8WXF7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 KRT18P14-201ENST00000534205 1250 ntBASIC20.4■□□□□ 0.86
ATL1Q8WXF7 AC138907.5-202ENST00000569484 235 ntBASIC20.4■□□□□ 0.86
ATL1Q8WXF7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATL1Q8WXF7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
ATL1Q8WXF7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATL1Q8WXF7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
ATL1Q8WXF7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATL1Q8WXF7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.39■□□□□ 0.86
ATL1Q8WXF7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
ATL1Q8WXF7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATL1Q8WXF7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATL1Q8WXF7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATL1Q8WXF7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATL1Q8WXF7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.39■□□□□ 0.85
ATL1Q8WXF7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.39■□□□□ 0.85
ATL1Q8WXF7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.39■□□□□ 0.85
ATL1Q8WXF7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.39■□□□□ 0.85
ATL1Q8WXF7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATL1Q8WXF7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATL1Q8WXF7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATL1Q8WXF7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 AP004607.4-201ENST00000530158 1459 ntBASIC20.38■□□□□ 0.85
ATL1Q8WXF7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms