Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC44A1Q8WWI5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC44A1Q8WWI5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC44A1Q8WWI5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC44A1Q8WWI5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC44A1Q8WWI5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC44A1Q8WWI5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 BX842568.3-201ENST00000418104 571 ntBASIC21■□□□□ 0.95
SLC44A1Q8WWI5 AC131281.2-201ENST00000520478 145 ntBASIC21■□□□□ 0.95
SLC44A1Q8WWI5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC44A1Q8WWI5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 AL121603.2-201ENST00000557373 2117 ntBASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC44A1Q8WWI5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC44A1Q8WWI5 AC055733.4-201ENST00000638462 1354 ntBASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 AC027702.1-201ENST00000563810 1770 ntBASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC44A1Q8WWI5 AC009237.3-201ENST00000393279 1427 ntBASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC44A1Q8WWI5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.95■□□□□ 0.95
SLC44A1Q8WWI5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms