Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.8■■□□□ 1.56
STAG1Q8WVM7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
STAG1Q8WVM7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 ID1-201ENST00000376105 1233 ntBASIC24.78■■□□□ 1.56
STAG1Q8WVM7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.78■■□□□ 1.56
STAG1Q8WVM7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 AC026185.1-201ENST00000445748 174 ntBASIC24.78■■□□□ 1.56
STAG1Q8WVM7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.78■■□□□ 1.56
STAG1Q8WVM7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 DUX4L16-201ENST00000555130 1264 ntBASIC24.77■■□□□ 1.56
STAG1Q8WVM7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 AC010536.3-201ENST00000620306 533 ntBASIC24.77■■□□□ 1.56
STAG1Q8WVM7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
STAG1Q8WVM7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
STAG1Q8WVM7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.75■■□□□ 1.55
STAG1Q8WVM7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
STAG1Q8WVM7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
STAG1Q8WVM7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
STAG1Q8WVM7 AC243732.1-201ENST00000612648 864 ntBASIC24.74■■□□□ 1.55
STAG1Q8WVM7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.74■■□□□ 1.55
STAG1Q8WVM7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.74■■□□□ 1.55
STAG1Q8WVM7 RBM17P2-201ENST00000616397 1405 ntBASIC24.74■■□□□ 1.55
STAG1Q8WVM7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
STAG1Q8WVM7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
STAG1Q8WVM7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
STAG1Q8WVM7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.74■■□□□ 1.55
STAG1Q8WVM7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.74■■□□□ 1.55
STAG1Q8WVM7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
STAG1Q8WVM7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
STAG1Q8WVM7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
STAG1Q8WVM7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
STAG1Q8WVM7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
STAG1Q8WVM7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
STAG1Q8WVM7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
STAG1Q8WVM7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.73■■□□□ 1.55
STAG1Q8WVM7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
STAG1Q8WVM7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms