Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 AC003102.1-202ENST00000563394 1796 ntBASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCLL1Q8TB92 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 KRT87P-202ENST00000534226 1464 ntBASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGCLL1Q8TB92 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLL1Q8TB92 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLL1Q8TB92 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLL1Q8TB92 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.58■□□□□ 0.89
HMGCLL1Q8TB92 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLL1Q8TB92 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.58■□□□□ 0.89
HMGCLL1Q8TB92 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLL1Q8TB92 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLL1Q8TB92 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.58■□□□□ 0.89
HMGCLL1Q8TB92 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCLL1Q8TB92 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCLL1Q8TB92 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.58■□□□□ 0.88
HMGCLL1Q8TB92 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
HMGCLL1Q8TB92 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLL1Q8TB92 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 EEF1DP3-203ENST00000566025 782 ntBASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 LINC01521-201ENST00000504184 1943 ntBASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HMGCLL1Q8TB92 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 AP004607.4-201ENST00000530158 1459 ntBASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
HMGCLL1Q8TB92 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 AC053503.5-201ENST00000601508 636 ntBASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLL1Q8TB92 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms