Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.74■■□□□ 1.39
RETREG2Q8NC44 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
RETREG2Q8NC44 AC133041.1-202ENST00000642053 222 ntBASIC23.74■■□□□ 1.39
RETREG2Q8NC44 AC010542.4-201ENST00000563151 1910 ntBASIC23.74■■□□□ 1.39
RETREG2Q8NC44 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RETREG2Q8NC44 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RETREG2Q8NC44 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 FAM201B-201ENST00000458407 597 ntBASIC23.73■■□□□ 1.39
RETREG2Q8NC44 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 AC105036.2-201ENST00000569468 176 ntBASIC23.73■■□□□ 1.39
RETREG2Q8NC44 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETREG2Q8NC44 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 AC069152.1-201ENST00000438030 544 ntBASIC23.72■■□□□ 1.39
RETREG2Q8NC44 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETREG2Q8NC44 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RETREG2Q8NC44 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
RETREG2Q8NC44 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.71■■□□□ 1.39
RETREG2Q8NC44 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETREG2Q8NC44 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RETREG2Q8NC44 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.71■■□□□ 1.39
RETREG2Q8NC44 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
RETREG2Q8NC44 KRT18P20-201ENST00000548986 1279 ntBASIC23.71■■□□□ 1.39
RETREG2Q8NC44 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETREG2Q8NC44 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETREG2Q8NC44 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
RETREG2Q8NC44 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 AP006587.3-201ENST00000525742 1516 ntBASIC23.7■■□□□ 1.38
RETREG2Q8NC44 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 AC133552.2-202ENST00000575694 574 ntBASIC23.7■■□□□ 1.38
RETREG2Q8NC44 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
RETREG2Q8NC44 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 CNN2P6-201ENST00000439038 900 ntBASIC23.69■■□□□ 1.38
RETREG2Q8NC44 AC010536.3-201ENST00000620306 533 ntBASIC23.69■■□□□ 1.38
RETREG2Q8NC44 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 AL137060.1-201ENST00000618151 2648 ntBASIC23.69■■□□□ 1.38
RETREG2Q8NC44 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RETREG2Q8NC44 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 AC010141.2-201ENST00000452426 721 ntBASIC23.68■■□□□ 1.38
RETREG2Q8NC44 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 FAM99A-202ENST00000538190 1989 ntBASIC23.68■■□□□ 1.38
RETREG2Q8NC44 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETREG2Q8NC44 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 AC073210.2-201ENST00000430369 194 ntBASIC23.67■■□□□ 1.38
RETREG2Q8NC44 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.67■■□□□ 1.38
RETREG2Q8NC44 AC138907.5-202ENST00000569484 235 ntBASIC23.67■■□□□ 1.38
RETREG2Q8NC44 MIR4651-201ENST00000582622 73 ntBASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms