Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHTF2Q8N3S3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 AF201337.1-201ENST00000520239 748 ntBASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 AC068338.2-201ENST00000563278 1430 ntBASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHTF2Q8N3S3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 AC007322.4-201ENST00000509611 723 ntBASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PHTF2Q8N3S3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 AC105036.2-201ENST00000569468 176 ntBASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PHTF2Q8N3S3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 C11orf96-202ENST00000528572 1834 ntBASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 SLC29A4P1-201ENST00000398760 971 ntBASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 CYP2T1P-201ENST00000432607 1285 ntBASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHTF2Q8N3S3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PHTF2Q8N3S3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PHTF2Q8N3S3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
PHTF2Q8N3S3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PHTF2Q8N3S3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PHTF2Q8N3S3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PHTF2Q8N3S3 CD99P1-205ENST00000527459 561 ntBASIC21.64■■□□□ 1.05
PHTF2Q8N3S3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.64■■□□□ 1.05
PHTF2Q8N3S3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.64■■□□□ 1.05
PHTF2Q8N3S3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.64■■□□□ 1.05
PHTF2Q8N3S3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.64■■□□□ 1.05
PHTF2Q8N3S3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PHTF2Q8N3S3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PHTF2Q8N3S3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PHTF2Q8N3S3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PHTF2Q8N3S3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PHTF2Q8N3S3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.63■■□□□ 1.05
PHTF2Q8N3S3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PHTF2Q8N3S3 AC069152.1-201ENST00000438030 544 ntBASIC21.63■■□□□ 1.05
PHTF2Q8N3S3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.63■■□□□ 1.05
PHTF2Q8N3S3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.63■■□□□ 1.05
PHTF2Q8N3S3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.63■■□□□ 1.05
PHTF2Q8N3S3 KRT18P6-201ENST00000555540 1265 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms