Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.28■■□□□ 1
PGBD3Q8N328 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.28■■□□□ 1
PGBD3Q8N328 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PGBD3Q8N328 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.28■■□□□ 1
PGBD3Q8N328 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PGBD3Q8N328 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PGBD3Q8N328 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PGBD3Q8N328 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PGBD3Q8N328 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
PGBD3Q8N328 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.27■■□□□ 1
PGBD3Q8N328 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD3Q8N328 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.27■■□□□ 1
PGBD3Q8N328 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD3Q8N328 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD3Q8N328 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.27■■□□□ 1
PGBD3Q8N328 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.27■■□□□ 1
PGBD3Q8N328 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.27■■□□□ 1
PGBD3Q8N328 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.27■■□□□ 1
PGBD3Q8N328 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.27■■□□□ 1
PGBD3Q8N328 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.27■■□□□ 1
PGBD3Q8N328 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PGBD3Q8N328 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PGBD3Q8N328 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PGBD3Q8N328 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PGBD3Q8N328 C1orf229-201ENST00000623686 2258 ntBASIC21.26■□□□□ 0.99
PGBD3Q8N328 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PGBD3Q8N328 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.26■□□□□ 0.99
PGBD3Q8N328 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.26■□□□□ 0.99
PGBD3Q8N328 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 AC008687.6-201ENST00000596318 630 ntBASIC21.26■□□□□ 0.99
PGBD3Q8N328 AC092118.2-201ENST00000613495 667 ntBASIC21.26■□□□□ 0.99
PGBD3Q8N328 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 CLDN5-201ENST00000403084 2357 ntBASIC21.26■□□□□ 0.99
PGBD3Q8N328 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 AC087742.1-201ENST00000575880 1738 ntBASIC21.26■□□□□ 0.99
PGBD3Q8N328 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PGBD3Q8N328 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD3Q8N328 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD3Q8N328 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD3Q8N328 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD3Q8N328 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PGBD3Q8N328 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD3Q8N328 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.25■□□□□ 0.99
PGBD3Q8N328 AC097658.1-201ENST00000475555 843 ntBASIC21.25■□□□□ 0.99
PGBD3Q8N328 ITM2C-210ENST00000620962 501 ntBASIC21.25■□□□□ 0.99
PGBD3Q8N328 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.25■□□□□ 0.99
PGBD3Q8N328 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.25■□□□□ 0.99
PGBD3Q8N328 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PGBD3Q8N328 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD3Q8N328 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD3Q8N328 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD3Q8N328 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD3Q8N328 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PGBD3Q8N328 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PGBD3Q8N328 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.24■□□□□ 0.99
PGBD3Q8N328 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PGBD3Q8N328 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
PGBD3Q8N328 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.24■□□□□ 0.99
PGBD3Q8N328 AC093827.2-201ENST00000512654 315 ntBASIC21.24■□□□□ 0.99
PGBD3Q8N328 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.24■□□□□ 0.99
PGBD3Q8N328 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.24■□□□□ 0.99
PGBD3Q8N328 AL591742.1-201ENST00000604433 565 ntBASIC21.24■□□□□ 0.99
PGBD3Q8N328 AC139530.1-201ENST00000575312 1977 ntBASIC21.24■□□□□ 0.99
PGBD3Q8N328 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PGBD3Q8N328 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PGBD3Q8N328 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.24■□□□□ 0.99
PGBD3Q8N328 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.24■□□□□ 0.99
PGBD3Q8N328 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PGBD3Q8N328 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PGBD3Q8N328 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PGBD3Q8N328 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PGBD3Q8N328 KRT16P2-201ENST00000414673 1423 ntBASIC21.23■□□□□ 0.99
PGBD3Q8N328 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PGBD3Q8N328 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PGBD3Q8N328 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PGBD3Q8N328 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PGBD3Q8N328 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PGBD3Q8N328 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PGBD3Q8N328 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms