Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
LYSMD3Q7Z3D4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
LYSMD3Q7Z3D4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
LYSMD3Q7Z3D4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LYSMD3Q7Z3D4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
LYSMD3Q7Z3D4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LYSMD3Q7Z3D4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.08■□□□□ 0.96
LYSMD3Q7Z3D4 AL137060.1-201ENST00000618151 2648 ntBASIC21.08■□□□□ 0.96
LYSMD3Q7Z3D4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD3Q7Z3D4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD3Q7Z3D4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD3Q7Z3D4 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.07■□□□□ 0.96
LYSMD3Q7Z3D4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD3Q7Z3D4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LYSMD3Q7Z3D4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD3Q7Z3D4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD3Q7Z3D4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD3Q7Z3D4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 AC008175.2-201ENST00000612840 297 ntBASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LYSMD3Q7Z3D4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD3Q7Z3D4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 SLC7A5P2-201ENST00000553010 536 ntBASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 AC137761.2-201ENST00000561729 223 ntBASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 AC145350.3-201ENST00000569033 163 ntBASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD3Q7Z3D4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 POU5F1P4-201ENST00000413175 1085 ntBASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 IKBKGP1-201ENST00000612193 1073 ntBASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD3Q7Z3D4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.02■□□□□ 0.96
LYSMD3Q7Z3D4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD3Q7Z3D4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD3Q7Z3D4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
LYSMD3Q7Z3D4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD3Q7Z3D4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.02■□□□□ 0.96
LYSMD3Q7Z3D4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD3Q7Z3D4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD3Q7Z3D4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD3Q7Z3D4 UBE2DNL-204ENST00000602536 740 ntBASIC21.02■□□□□ 0.96
LYSMD3Q7Z3D4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms