Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
C9orf139Q6ZV77 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.95■□□□□ 0.3
C9orf139Q6ZV77 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 PKD1P6-201ENST00000343738 4769 ntBASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 AC079834.2-201ENST00000609776 1949 ntBASIC16.94■□□□□ 0.3
C9orf139Q6ZV77 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 BX276092.2-201ENST00000417668 665 ntBASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 FAM201B-201ENST00000458407 597 ntBASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 AC010980.2-201ENST00000587099 1412 ntBASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf139Q6ZV77 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 MIR4651-201ENST00000582622 73 ntBASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 MYC-209ENST00000641252 345 ntBASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 AL117328.2-201ENST00000624617 1940 ntBASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
C9orf139Q6ZV77 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 AC233723.2-201ENST00000623798 2106 ntBASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 FAM21FP-204ENST00000608637 956 ntBASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
C9orf139Q6ZV77 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms