Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRAT1Q6PJG6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.05■□□□□ 0.96
BRAT1Q6PJG6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BRAT1Q6PJG6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BRAT1Q6PJG6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRAT1Q6PJG6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRAT1Q6PJG6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
BRAT1Q6PJG6 AC244015.2-201ENST00000616358 1861 ntBASIC21.05■□□□□ 0.96
BRAT1Q6PJG6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 CNN2P6-201ENST00000439038 900 ntBASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 AC007322.4-201ENST00000509611 723 ntBASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 RBM17P2-201ENST00000616397 1405 ntBASIC21.04■□□□□ 0.96
BRAT1Q6PJG6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.03■□□□□ 0.96
BRAT1Q6PJG6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 AC245052.3-201ENST00000450182 901 ntBASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
BRAT1Q6PJG6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
BRAT1Q6PJG6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
BRAT1Q6PJG6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
BRAT1Q6PJG6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 FBXW4P1-201ENST00000426721 2239 ntBASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 CROCCP5-201ENST00000436658 830 ntBASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 AC006970.2-201ENST00000450065 779 ntBASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRAT1Q6PJG6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21■□□□□ 0.95
BRAT1Q6PJG6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21■□□□□ 0.95
BRAT1Q6PJG6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21■□□□□ 0.95
BRAT1Q6PJG6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRAT1Q6PJG6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRAT1Q6PJG6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRAT1Q6PJG6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRAT1Q6PJG6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
BRAT1Q6PJG6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
BRAT1Q6PJG6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21■□□□□ 0.95
BRAT1Q6PJG6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRAT1Q6PJG6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21■□□□□ 0.95
BRAT1Q6PJG6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
BRAT1Q6PJG6 AC005181.1-201ENST00000604782 1256 ntBASIC21■□□□□ 0.95
BRAT1Q6PJG6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21■□□□□ 0.95
BRAT1Q6PJG6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRAT1Q6PJG6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRAT1Q6PJG6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21■□□□□ 0.95
BRAT1Q6PJG6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRAT1Q6PJG6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21■□□□□ 0.95
BRAT1Q6PJG6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.99■□□□□ 0.95
BRAT1Q6PJG6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BRAT1Q6PJG6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRAT1Q6PJG6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.99■□□□□ 0.95
BRAT1Q6PJG6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.99■□□□□ 0.95
BRAT1Q6PJG6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRAT1Q6PJG6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRAT1Q6PJG6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRAT1Q6PJG6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BRAT1Q6PJG6 MIR663A-201ENST00000385250 93 ntBASIC20.99■□□□□ 0.95
BRAT1Q6PJG6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms