Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 CD177P1-201ENST00000606252 935 ntBASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCRAQ6ISU1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCRAQ6ISU1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 AL135905.2-201ENST00000584934 1404 ntBASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 RN7SL850P-201ENST00000579959 291 ntBASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PTCRAQ6ISU1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.83■■□□□ 1.08
PTCRAQ6ISU1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.83■■□□□ 1.08
PTCRAQ6ISU1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.83■■□□□ 1.08
PTCRAQ6ISU1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTCRAQ6ISU1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
PTCRAQ6ISU1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 AC091799.1-201ENST00000422823 811 ntBASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTCRAQ6ISU1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 KRT18P68-201ENST00000392293 1000 ntBASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 AL355075.4-201ENST00000554988 638 ntBASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCRAQ6ISU1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 AC124016.1-201ENST00000609552 612 ntBASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 AC113410.3-201ENST00000623366 203 ntBASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCRAQ6ISU1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 AC133681.1-201ENST00000465482 601 ntBASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 MTDHP1-201ENST00000605323 784 ntBASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 AL023875.1-201ENST00000640777 796 ntBASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCRAQ6ISU1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms