Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ABHD17AP1-201ENST00000358206 933 ntBASIC18.91■□□□□ 0.62
RTL6Q6ICC9 AF201337.1-201ENST00000520239 748 ntBASIC18.91■□□□□ 0.62
RTL6Q6ICC9 AC133552.2-202ENST00000575694 574 ntBASIC18.91■□□□□ 0.62
RTL6Q6ICC9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTL6Q6ICC9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL6Q6ICC9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 SLC29A4P1-201ENST00000398760 971 ntBASIC18.9■□□□□ 0.62
RTL6Q6ICC9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 AC105036.2-201ENST00000569468 176 ntBASIC18.9■□□□□ 0.62
RTL6Q6ICC9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 AC013268.1-206ENST00000638368 961 ntBASIC18.9■□□□□ 0.62
RTL6Q6ICC9 AC112229.1-201ENST00000639295 961 ntBASIC18.9■□□□□ 0.62
RTL6Q6ICC9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL6Q6ICC9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTL6Q6ICC9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.89■□□□□ 0.62
RTL6Q6ICC9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTL6Q6ICC9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTL6Q6ICC9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RTL6Q6ICC9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
RTL6Q6ICC9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 AC068338.2-201ENST00000563278 1430 ntBASIC18.89■□□□□ 0.61
RTL6Q6ICC9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTL6Q6ICC9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 AC092053.2-201ENST00000640557 1818 ntBASIC18.88■□□□□ 0.61
RTL6Q6ICC9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTL6Q6ICC9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 CD99P1-205ENST00000527459 561 ntBASIC18.87■□□□□ 0.61
RTL6Q6ICC9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTL6Q6ICC9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL6Q6ICC9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL6Q6ICC9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.86■□□□□ 0.61
RTL6Q6ICC9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL6Q6ICC9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL6Q6ICC9 CYP2T1P-201ENST00000432607 1285 ntBASIC18.86■□□□□ 0.61
RTL6Q6ICC9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.86■□□□□ 0.61
RTL6Q6ICC9 AC007322.4-201ENST00000509611 723 ntBASIC18.86■□□□□ 0.61
RTL6Q6ICC9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTL6Q6ICC9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.86■□□□□ 0.61
RTL6Q6ICC9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.86■□□□□ 0.61
RTL6Q6ICC9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.86■□□□□ 0.61
RTL6Q6ICC9 AC008175.2-201ENST00000612840 297 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms