Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD4Q5XG99 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.91
LYSMD4Q5XG99 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 C1QBPP2-201ENST00000528754 825 ntBASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 PNMA6B-201ENST00000538162 1200 ntBASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYSMD4Q5XG99 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 MCRIP2P1-201ENST00000394346 511 ntBASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 KRT17P3-201ENST00000420566 1262 ntBASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 RPPH1-201ENST00000516869 333 ntBASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LYSMD4Q5XG99 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 AC092368.3-202ENST00000574180 1591 ntBASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYSMD4Q5XG99 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LYSMD4Q5XG99 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LYSMD4Q5XG99 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.65■□□□□ 0.9
LYSMD4Q5XG99 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LYSMD4Q5XG99 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LYSMD4Q5XG99 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LYSMD4Q5XG99 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms