Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00242Q5T6M2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 AP006587.3-201ENST00000525742 1516 ntBASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 AC007952.6-201ENST00000573168 2673 ntBASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 AC003957.1-201ENST00000625108 2673 ntBASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 AL391422.3-201ENST00000603791 2761 ntBASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 AC009299.2-201ENST00000482477 511 ntBASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 AC092171.4-201ENST00000609130 632 ntBASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00242Q5T6M2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00242Q5T6M2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 PCDHAC2-203ENST00000615316 3011 ntBASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 AC121338.2-201ENST00000622535 1744 ntBASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00242Q5T6M2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms