Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LONRF3Q496Y0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.82■■□□□ 1.4
LONRF3Q496Y0 AL049796.1-201ENST00000565336 1766 ntBASIC23.81■■□□□ 1.4
LONRF3Q496Y0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LONRF3Q496Y0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.81■■□□□ 1.4
LONRF3Q496Y0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LONRF3Q496Y0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LONRF3Q496Y0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LONRF3Q496Y0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.81■■□□□ 1.4
LONRF3Q496Y0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
LONRF3Q496Y0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 AC090192.1-201ENST00000517740 490 ntBASIC23.8■■□□□ 1.4
LONRF3Q496Y0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LONRF3Q496Y0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
LONRF3Q496Y0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LONRF3Q496Y0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LONRF3Q496Y0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LONRF3Q496Y0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LONRF3Q496Y0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LONRF3Q496Y0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.79■■□□□ 1.4
LONRF3Q496Y0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.79■■□□□ 1.4
LONRF3Q496Y0 RARRES2P11-201ENST00000635158 484 ntBASIC23.79■■□□□ 1.4
LONRF3Q496Y0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.79■■□□□ 1.4
LONRF3Q496Y0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LONRF3Q496Y0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.79■■□□□ 1.4
LONRF3Q496Y0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LONRF3Q496Y0 AC055733.4-201ENST00000638462 1354 ntBASIC23.78■■□□□ 1.4
LONRF3Q496Y0 AL157384.1-201ENST00000445995 2473 ntBASIC23.77■■□□□ 1.4
LONRF3Q496Y0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 KRT18P61-201ENST00000585825 1298 ntBASIC23.77■■□□□ 1.4
LONRF3Q496Y0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LONRF3Q496Y0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LONRF3Q496Y0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LONRF3Q496Y0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LONRF3Q496Y0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.76■■□□□ 1.39
LONRF3Q496Y0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
LONRF3Q496Y0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LONRF3Q496Y0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms