Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 SAS5YOR213C 747 nt2.96□□□□□ -1.94
RUP1Q12242 YOR387CYOR387C 621 nt2.96□□□□□ -1.94
RUP1Q12242 GRX5YPL059W 453 nt2.96□□□□□ -1.94
RUP1Q12242 KAR4YCL055W 1008 nt2.96□□□□□ -1.94
RUP1Q12242 MDV1YJL112W 2145 nt2.96□□□□□ -1.94
RUP1Q12242 BNA4YBL098W 1383 nt2.96□□□□□ -1.94
RUP1Q12242 ESA1YOR244W 1338 nt2.95□□□□□ -1.94
RUP1Q12242 YBP2YGL060W 1926 nt2.95□□□□□ -1.94
RUP1Q12242 YCG1YDR325W 3108 nt2.95□□□□□ -1.94
RUP1Q12242 VAC14YLR386W 2643 nt2.95□□□□□ -1.94
RUP1Q12242 IOC3YFR013W 2364 nt2.95□□□□□ -1.94
RUP1Q12242 RAX2YLR084C 3663 nt2.95□□□□□ -1.94
RUP1Q12242 RIM1YCR028C-A 408 nt2.95□□□□□ -1.94
RUP1Q12242 snR68snR68 136 nt2.95□□□□□ -1.94
RUP1Q12242 FMN1YDR236C 657 nt2.95□□□□□ -1.94
RUP1Q12242 RPB9YGL070C 369 nt2.95□□□□□ -1.94
RUP1Q12242 tQ(UUG)BtQ(UUG)B 72 nt2.95□□□□□ -1.94
RUP1Q12242 YKL115CYKL115C 393 nt2.95□□□□□ -1.94
RUP1Q12242 YKR011CYKR011C 1062 nt2.95□□□□□ -1.94
RUP1Q12242 RPL15AYLR029C 615 nt2.95□□□□□ -1.94
RUP1Q12242 YOL114CYOL114C 609 nt2.95□□□□□ -1.94
RUP1Q12242 UBP5YER144C 2418 nt2.95□□□□□ -1.94
RUP1Q12242 MPS1YDL028C 2295 nt2.95□□□□□ -1.94
RUP1Q12242 NMD2YHR077C 3270 nt2.94□□□□□ -1.94
RUP1Q12242 NOP56YLR197W 1515 nt2.94□□□□□ -1.94
RUP1Q12242 POL4YCR014C 1749 nt2.94□□□□□ -1.94
RUP1Q12242 TSC11YER093C 4293 nt2.94□□□□□ -1.94
RUP1Q12242 ATP16YDL004W 483 nt2.94□□□□□ -1.94
RUP1Q12242 YBL029C-AYBL029C-A 285 nt2.94□□□□□ -1.94
RUP1Q12242 INO4YOL108C 456 nt2.94□□□□□ -1.94
RUP1Q12242 YPR027CYPR027C 834 nt2.94□□□□□ -1.94
RUP1Q12242 PHO81YGR233C 3537 nt2.94□□□□□ -1.94
RUP1Q12242 BCH1YMR237W 2175 nt2.94□□□□□ -1.94
RUP1Q12242 PEX5YDR244W 1839 nt2.93□□□□□ -1.94
RUP1Q12242 RPA190YOR341W 4995 nt2.93□□□□□ -1.94
RUP1Q12242 MSH2YOL090W 2895 nt2.93□□□□□ -1.94
RUP1Q12242 tF(GAA)DtF(GAA)D 73 nt2.93□□□□□ -1.94
RUP1Q12242 tF(GAA)NtF(GAA)N 73 nt2.93□□□□□ -1.94
RUP1Q12242 EFG1YGR271C-A 702 nt2.93□□□□□ -1.94
RUP1Q12242 VMA10YHR039C-A 345 nt2.93□□□□□ -1.94
RUP1Q12242 MRPL16YBL038W 699 nt2.93□□□□□ -1.94
RUP1Q12242 YBL039W-BYBL039W-B 180 nt2.93□□□□□ -1.94
RUP1Q12242 AIM4YBR194W 372 nt2.93□□□□□ -1.94
RUP1Q12242 ARP5YNL059C 2268 nt2.93□□□□□ -1.94
RUP1Q12242 MUB1YMR100W 1863 nt2.92□□□□□ -1.94
RUP1Q12242 YGR067CYGR067C 2415 nt2.92□□□□□ -1.94
RUP1Q12242 BNI4YNL233W 2679 nt2.92□□□□□ -1.94
RUP1Q12242 EPL1YFL024C 2499 nt2.92□□□□□ -1.94
RUP1Q12242 AVT5YBL089W 1380 nt2.92□□□□□ -1.94
RUP1Q12242 VAB2YEL005C 849 nt2.92□□□□□ -1.94
RUP1Q12242 COX3Q0275 810 nt2.92□□□□□ -1.94
RUP1Q12242 YIL141WYIL141W 390 nt2.92□□□□□ -1.94
RUP1Q12242 YJL032WYJL032W 315 nt2.92□□□□□ -1.94
RUP1Q12242 ERG20YJL167W 1059 nt2.92□□□□□ -1.94
RUP1Q12242 YLR154C-HYLR154C-H 132 nt2.92□□□□□ -1.94
RUP1Q12242 YLR156C-AYLR156C-A 132 nt2.92□□□□□ -1.94
RUP1Q12242 YLR157C-CYLR157C-C 132 nt2.92□□□□□ -1.94
RUP1Q12242 YLR159C-AYLR159C-A 132 nt2.92□□□□□ -1.94
RUP1Q12242 YNL109WYNL109W 546 nt2.92□□□□□ -1.94
RUP1Q12242 MPD2YOL088C 834 nt2.92□□□□□ -1.94
RUP1Q12242 YOR277CYOR277C 309 nt2.92□□□□□ -1.94
RUP1Q12242 YOR385WYOR385W 873 nt2.92□□□□□ -1.94
RUP1Q12242 RPC40YPR110C 1008 nt2.92□□□□□ -1.94
RUP1Q12242 MDM36YPR083W 1740 nt2.92□□□□□ -1.94
RUP1Q12242 PEX6YNL329C 3093 nt2.92□□□□□ -1.94
RUP1Q12242 MNT3YIL014W 1893 nt2.92□□□□□ -1.94
RUP1Q12242 EMP70YLR083C 2004 nt2.92□□□□□ -1.94
RUP1Q12242 PRP8YHR165C 7242 nt2.91□□□□□ -1.94
RUP1Q12242 STP2YHR006W 1626 nt2.91□□□□□ -1.94
RUP1Q12242 STE23YLR389C 3084 nt2.91□□□□□ -1.94
RUP1Q12242 NGG1YDR176W 2109 nt2.91□□□□□ -1.94
RUP1Q12242 RMD6YEL072W 696 nt2.91□□□□□ -1.94
RUP1Q12242 RRT13YER066W 558 nt2.91□□□□□ -1.94
RUP1Q12242 LST7YGR057C 729 nt2.91□□□□□ -1.94
RUP1Q12242 DSE2YHR143W 978 nt2.91□□□□□ -1.94
RUP1Q12242 YHR212CYHR212C 336 nt2.91□□□□□ -1.94
RUP1Q12242 YKL069WYKL069W 543 nt2.91□□□□□ -1.94
RUP1Q12242 YKE2YLR200W 345 nt2.91□□□□□ -1.94
RUP1Q12242 YAR060CYAR060C 336 nt2.91□□□□□ -1.94
RUP1Q12242 RPL6AYML073C 531 nt2.91□□□□□ -1.94
RUP1Q12242 PDR17YNL264C 1053 nt2.91□□□□□ -1.94
RUP1Q12242 YOL019W-AYOL019W-A 153 nt2.91□□□□□ -1.94
RUP1Q12242 TCP1YDR212W 1680 nt2.91□□□□□ -1.94
RUP1Q12242 GYL1YMR192W 2163 nt2.91□□□□□ -1.94
RUP1Q12242 MYO5YMR109W 3660 nt2.91□□□□□ -1.94
RUP1Q12242 TIF4631YGR162W 2859 nt2.9□□□□□ -1.94
RUP1Q12242 KAP104YBR017C 2757 nt2.9□□□□□ -1.94
RUP1Q12242 NOP12YOL041C 1380 nt2.9□□□□□ -1.94
RUP1Q12242 YER046W-AYER046W-A 330 nt2.9□□□□□ -1.95
RUP1Q12242 YER158W-AYER158W-A 216 nt2.9□□□□□ -1.95
RUP1Q12242 YHL005CYHL005C 393 nt2.9□□□□□ -1.95
RUP1Q12242 ATG10YLL042C 504 nt2.9□□□□□ -1.95
RUP1Q12242 YLR050CYLR050C 486 nt2.9□□□□□ -1.95
RUP1Q12242 NDL1YLR254C 570 nt2.9□□□□□ -1.95
RUP1Q12242 TPT1YOL102C 693 nt2.9□□□□□ -1.95
RUP1Q12242 REG1YDR028C 3045 nt2.9□□□□□ -1.95
RUP1Q12242 CBP2YHL038C 1893 nt2.9□□□□□ -1.95
RUP1Q12242 DIA2YOR080W 2199 nt2.9□□□□□ -1.95
RUP1Q12242 HEH2YDR458C 1992 nt2.89□□□□□ -1.95
RUP1Q12242 UBC13YDR092W 462 nt2.89□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms