Protein–RNA interactions for Protein: Q07793

TY1B-DR4, Transposon Ty1-DR4 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR4Q07793 YBL096CYBL096C 309 nt2.6□□□□□ -1.99
TY1B-DR4Q07793 ORC4YPR162C 1590 nt2.6□□□□□ -1.99
TY1B-DR4Q07793 YGL176CYGL176C 1665 nt2.6□□□□□ -1.99
TY1B-DR4Q07793 PKR1YMR123W 369 nt2.6□□□□□ -1.99
TY1B-DR4Q07793 YOL057WYOL057W 2136 nt2.59□□□□□ -1.99
TY1B-DR4Q07793 PEX5YDR244W 1839 nt2.59□□□□□ -2
TY1B-DR4Q07793 TRA1YHR099W 11235 nt2.59□□□□□ -2
TY1B-DR4Q07793 PGS1YCL004W 1566 nt2.59□□□□□ -2
TY1B-DR4Q07793 RGA2YDR379W 3030 nt2.58□□□□□ -2
TY1B-DR4Q07793 TPO5YKL174C 1857 nt2.58□□□□□ -2
TY1B-DR4Q07793 VPS15YBR097W 4365 nt2.58□□□□□ -2
TY1B-DR4Q07793 UBP8YMR223W 1416 nt2.58□□□□□ -2
TY1B-DR4Q07793 RNR4YGR180C 1038 nt2.57□□□□□ -2
TY1B-DR4Q07793 YGR293CYGR293C 462 nt2.57□□□□□ -2
TY1B-DR4Q07793 YNL235CYNL235C 432 nt2.57□□□□□ -2
TY1B-DR4Q07793 VPS54YDR027C 2670 nt2.57□□□□□ -2
TY1B-DR4Q07793 UTP20YBL004W 7482 nt2.57□□□□□ -2
TY1B-DR4Q07793 LCB4YOR171C 1875 nt2.57□□□□□ -2
TY1B-DR4Q07793 GPP2YER062C 753 nt2.57□□□□□ -2
TY1B-DR4Q07793 YJR056CYJR056C 711 nt2.57□□□□□ -2
TY1B-DR4Q07793 OSW5YMR148W 447 nt2.57□□□□□ -2
TY1B-DR4Q07793 MED2YDL005C 1296 nt2.56□□□□□ -2
TY1B-DR4Q07793 SMX2YFL017W-A 234 nt2.56□□□□□ -2
TY1B-DR4Q07793 RPS1AYLR441C 768 nt2.56□□□□□ -2
TY1B-DR4Q07793 RNY1YPL123C 1305 nt2.55□□□□□ -2
TY1B-DR4Q07793 PEX11YOL147C 711 nt2.55□□□□□ -2
TY1B-DR4Q07793 YOR192C-BYOR192C-B 5313 nt2.55□□□□□ -2
TY1B-DR4Q07793 YBL073WYBL073W 312 nt2.54□□□□□ -2
TY1B-DR4Q07793 NOP14YDL148C 2433 nt2.54□□□□□ -2
TY1B-DR4Q07793 YJL113WYJL113W 4647 nt2.54□□□□□ -2
TY1B-DR4Q07793 tH(GUG)E1tH(GUG)E1 72 nt2.53□□□□□ -2
TY1B-DR4Q07793 tH(GUG)E2tH(GUG)E2 72 nt2.53□□□□□ -2
TY1B-DR4Q07793 tH(GUG)G1tH(GUG)G1 72 nt2.53□□□□□ -2
TY1B-DR4Q07793 tH(GUG)G2tH(GUG)G2 72 nt2.53□□□□□ -2
TY1B-DR4Q07793 tH(GUG)HtH(GUG)H 72 nt2.53□□□□□ -2
TY1B-DR4Q07793 tH(GUG)KtH(GUG)K 72 nt2.53□□□□□ -2
TY1B-DR4Q07793 tH(GUG)MtH(GUG)M 72 nt2.53□□□□□ -2
TY1B-DR4Q07793 YER121WYER121W 345 nt2.53□□□□□ -2
TY1B-DR4Q07793 CWC22YGR278W 1734 nt2.53□□□□□ -2
TY1B-DR4Q07793 NEL1YHR035W 1893 nt2.53□□□□□ -2
TY1B-DR4Q07793 ACM1YPL267W 630 nt2.53□□□□□ -2
TY1B-DR4Q07793 SPO75YLL005C 2607 nt2.53□□□□□ -2
TY1B-DR4Q07793 USO1YDL058W 5373 nt2.53□□□□□ -2
TY1B-DR4Q07793 SWC4YGR002C 1431 nt2.53□□□□□ -2
TY1B-DR4Q07793 CTH1YDR151C 978 nt2.53□□□□□ -2
TY1B-DR4Q07793 DCG1YIR030C 735 nt2.53□□□□□ -2
TY1B-DR4Q07793 HRI1YLR301W 735 nt2.53□□□□□ -2
TY1B-DR4Q07793 DAD3YBR233W-A 285 nt2.53□□□□□ -2
TY1B-DR4Q07793 BUD3YCL014W 4911 nt2.52□□□□□ -2.01
TY1B-DR4Q07793 YIL102CYIL102C 306 nt2.52□□□□□ -2.01
TY1B-DR4Q07793 JJJ3YJR097W 519 nt2.52□□□□□ -2.01
TY1B-DR4Q07793 TMA64YDR117C 1698 nt2.51□□□□□ -2.01
TY1B-DR4Q07793 PHO13YDL236W 939 nt2.51□□□□□ -2.01
TY1B-DR4Q07793 INA22YIR024C 651 nt2.51□□□□□ -2.01
TY1B-DR4Q07793 IBA57YJR122W 1494 nt2.51□□□□□ -2.01
TY1B-DR4Q07793 VBA4YDR119W 2307 nt2.51□□□□□ -2.01
TY1B-DR4Q07793 PLC1YPL268W 2610 nt2.51□□□□□ -2.01
TY1B-DR4Q07793 ALB1YJL122W 528 nt2.5□□□□□ -2.01
TY1B-DR4Q07793 UFD2YDL190C 2886 nt2.5□□□□□ -2.01
TY1B-DR4Q07793 MSS116YDR194C 1995 nt2.5□□□□□ -2.01
TY1B-DR4Q07793 ATP17YDR377W 306 nt2.5□□□□□ -2.01
TY1B-DR4Q07793 TPM2YIL138C 486 nt2.5□□□□□ -2.01
TY1B-DR4Q07793 COQ9YLR201C 783 nt2.49□□□□□ -2.01
TY1B-DR4Q07793 YLR462WYLR462W 609 nt2.49□□□□□ -2.01
TY1B-DR4Q07793 SNO3YFL060C 669 nt2.48□□□□□ -2.01
TY1B-DR4Q07793 EAF7YNL136W 1278 nt2.48□□□□□ -2.01
TY1B-DR4Q07793 SNO2YNL334C 669 nt2.48□□□□□ -2.01
TY1B-DR4Q07793 TAM41YGR046W 1158 nt2.47□□□□□ -2.01
TY1B-DR4Q07793 RIM13YMR154C 2184 nt2.47□□□□□ -2.01
TY1B-DR4Q07793 YHR214C-BYHR214C-B 5382 nt2.47□□□□□ -2.01
TY1B-DR4Q07793 PHO2YDL106C 1680 nt2.47□□□□□ -2.01
TY1B-DR4Q07793 FYV8YGR196C 2454 nt2.47□□□□□ -2.01
TY1B-DR4Q07793 BNI1YNL271C 5862 nt2.46□□□□□ -2.01
TY1B-DR4Q07793 QCR9YGR183C 201 nt2.46□□□□□ -2.02
TY1B-DR4Q07793 SNL1YIL016W 480 nt2.46□□□□□ -2.02
TY1B-DR4Q07793 YML053CYML053C 639 nt2.46□□□□□ -2.02
TY1B-DR4Q07793 PRM2YIL037C 1971 nt2.46□□□□□ -2.02
TY1B-DR4Q07793 SIR3YLR442C 2937 nt2.46□□□□□ -2.02
TY1B-DR4Q07793 SEC65YML105C 822 nt2.45□□□□□ -2.02
TY1B-DR4Q07793 NUP157YER105C 4176 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 RIC1YLR039C 3171 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 MSM1YGR171C 1728 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 tF(GAA)BtF(GAA)B 73 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 tF(GAA)FtF(GAA)F 73 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 tF(GAA)GtF(GAA)G 73 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 tF(GAA)H1tF(GAA)H1 73 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 tF(GAA)H2tF(GAA)H2 73 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 tF(GAA)MtF(GAA)M 73 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 tF(GAA)P1tF(GAA)P1 73 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 tF(GAA)P2tF(GAA)P2 73 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 RPS25AYGR027C 327 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 YHR095WYHR095W 495 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 REC102YLR329W 795 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 YNL035CYNL035C 1170 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 PRT1YOR361C 2292 nt2.44□□□□□ -2.02
TY1B-DR4Q07793 MCT1YOR221C 1083 nt2.43□□□□□ -2.02
TY1B-DR4Q07793 MDM32YOR147W 1869 nt2.43□□□□□ -2.02
TY1B-DR4Q07793 YLR422WYLR422W 5799 nt2.43□□□□□ -2.02
TY1B-DR4Q07793 LSM1YJL124C 519 nt2.42□□□□□ -2.02
TY1B-DR4Q07793 ATP11YNL315C 957 nt2.42□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms