Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YDR203WYDR203W 318 nt3.26□□□□□ -1.89
VPS38Q05919 PEX10YDR265W 1014 nt3.26□□□□□ -1.89
VPS38Q05919 YER158W-AYER158W-A 216 nt3.26□□□□□ -1.89
VPS38Q05919 TAD1YGL243W 1203 nt3.26□□□□□ -1.89
VPS38Q05919 RPS23AYGR118W 438 nt3.26□□□□□ -1.89
VPS38Q05919 COX23YHR116W 456 nt3.26□□□□□ -1.89
VPS38Q05919 YPT52YKR014C 705 nt3.26□□□□□ -1.89
VPS38Q05919 RPS28BYLR264W 204 nt3.26□□□□□ -1.89
VPS38Q05919 GCY1YOR120W 939 nt3.26□□□□□ -1.89
VPS38Q05919 TUM1YOR251C 915 nt3.26□□□□□ -1.89
VPS38Q05919 YPL107WYPL107W 747 nt3.26□□□□□ -1.89
VPS38Q05919 RPS23BYPR132W 438 nt3.26□□□□□ -1.89
VPS38Q05919 snR35snR35 204 nt3.26□□□□□ -1.89
VPS38Q05919 NDC80YIL144W 2076 nt3.26□□□□□ -1.89
VPS38Q05919 HEH2YDR458C 1992 nt3.25□□□□□ -1.89
VPS38Q05919 EPL1YFL024C 2499 nt3.25□□□□□ -1.89
VPS38Q05919 YJR020WYJR020W 333 nt3.25□□□□□ -1.89
VPS38Q05919 GIM5YML094W 492 nt3.25□□□□□ -1.89
VPS38Q05919 RCE1YMR274C 948 nt3.25□□□□□ -1.89
VPS38Q05919 BRX1YOL077C 876 nt3.25□□□□□ -1.89
VPS38Q05919 ERT1YBR239C 1590 nt3.25□□□□□ -1.89
VPS38Q05919 YDL050CYDL050C 372 nt3.24□□□□□ -1.89
VPS38Q05919 SLU7YDR088C 1149 nt3.24□□□□□ -1.89
VPS38Q05919 RAV2YDR202C 1056 nt3.24□□□□□ -1.89
VPS38Q05919 FMN1YDR236C 657 nt3.24□□□□□ -1.89
VPS38Q05919 VMA10YHR039C-A 345 nt3.24□□□□□ -1.89
VPS38Q05919 YHR212CYHR212C 336 nt3.24□□□□□ -1.89
VPS38Q05919 CAP1YKL007W 807 nt3.24□□□□□ -1.89
VPS38Q05919 RCN1YKL159C 636 nt3.24□□□□□ -1.89
VPS38Q05919 TPK3YKL166C 1197 nt3.24□□□□□ -1.89
VPS38Q05919 YAR060CYAR060C 336 nt3.24□□□□□ -1.89
VPS38Q05919 OST6YML019W 999 nt3.24□□□□□ -1.89
VPS38Q05919 YOR387CYOR387C 621 nt3.24□□□□□ -1.89
VPS38Q05919 RRP15YPR143W 753 nt3.24□□□□□ -1.89
VPS38Q05919 snR42snR42 351 nt3.24□□□□□ -1.89
VPS38Q05919 VAC14YLR386W 2643 nt3.24□□□□□ -1.89
VPS38Q05919 MPS1YDL028C 2295 nt3.24□□□□□ -1.89
VPS38Q05919 XRN1YGL173C 4587 nt3.24□□□□□ -1.89
VPS38Q05919 ERG11YHR007C 1593 nt3.24□□□□□ -1.89
VPS38Q05919 PFK26YIL107C 2484 nt3.24□□□□□ -1.89
VPS38Q05919 YAK1YJL141C 2424 nt3.23□□□□□ -1.89
VPS38Q05919 YLR108CYLR108C 1458 nt3.23□□□□□ -1.89
VPS38Q05919 NSE4YDL105W 1209 nt3.23□□□□□ -1.89
VPS38Q05919 AGE1YDR524C 1449 nt3.23□□□□□ -1.89
VPS38Q05919 LOC1YFR001W 615 nt3.23□□□□□ -1.89
VPS38Q05919 YGL214WYGL214W 486 nt3.23□□□□□ -1.89
VPS38Q05919 LIN1YHR156C 1023 nt3.23□□□□□ -1.89
VPS38Q05919 RPL15AYLR029C 615 nt3.23□□□□□ -1.89
VPS38Q05919 ARL3YPL051W 597 nt3.23□□□□□ -1.89
VPS38Q05919 PEX5YDR244W 1839 nt3.23□□□□□ -1.89
VPS38Q05919 HBT1YDL223C 3141 nt3.23□□□□□ -1.89
VPS38Q05919 AVT5YBL089W 1380 nt3.23□□□□□ -1.89
VPS38Q05919 REG1YDR028C 3045 nt3.22□□□□□ -1.89
VPS38Q05919 HFM1YGL251C 3564 nt3.22□□□□□ -1.89
VPS38Q05919 ITC1YGL133W 3795 nt3.22□□□□□ -1.89
VPS38Q05919 IOC3YFR013W 2364 nt3.22□□□□□ -1.89
VPS38Q05919 DOA4YDR069C 2781 nt3.22□□□□□ -1.89
VPS38Q05919 RTT105YER104W 627 nt3.22□□□□□ -1.89
VPS38Q05919 PGD1YGL025C 1194 nt3.22□□□□□ -1.89
VPS38Q05919 YHL005CYHL005C 393 nt3.22□□□□□ -1.89
VPS38Q05919 YIL141WYIL141W 390 nt3.22□□□□□ -1.89
VPS38Q05919 ATG27YJL178C 816 nt3.22□□□□□ -1.89
VPS38Q05919 YKL069WYKL069W 543 nt3.22□□□□□ -1.89
VPS38Q05919 SRL4YPL033C 846 nt3.22□□□□□ -1.89
VPS38Q05919 TFC4YGR047C 3078 nt3.22□□□□□ -1.89
VPS38Q05919 ENA5YDR038C 3276 nt3.22□□□□□ -1.89
VPS38Q05919 ENA2YDR039C 3276 nt3.22□□□□□ -1.89
VPS38Q05919 ENA1YDR040C 3276 nt3.22□□□□□ -1.89
VPS38Q05919 KRE2YDR483W 1329 nt3.21□□□□□ -1.89
VPS38Q05919 STT4YLR305C 5703 nt3.21□□□□□ -1.89
VPS38Q05919 TCP1YDR212W 1680 nt3.21□□□□□ -1.9
VPS38Q05919 FUS2YMR232W 2034 nt3.21□□□□□ -1.9
VPS38Q05919 YDR042CYDR042C 603 nt3.21□□□□□ -1.9
VPS38Q05919 HMO1YDR174W 741 nt3.21□□□□□ -1.9
VPS38Q05919 YGL039WYGL039W 1047 nt3.21□□□□□ -1.9
VPS38Q05919 YGR160WYGR160W 612 nt3.21□□□□□ -1.9
VPS38Q05919 YHR180WYHR180W 492 nt3.21□□□□□ -1.9
VPS38Q05919 PRM6YML047C 1059 nt3.21□□□□□ -1.9
VPS38Q05919 MPD2YOL088C 834 nt3.21□□□□□ -1.9
VPS38Q05919 YBR053CYBR053C 1077 nt3.21□□□□□ -1.9
VPS38Q05919 RPC40YPR110C 1008 nt3.21□□□□□ -1.9
VPS38Q05919 MUS81YDR386W 1899 nt3.21□□□□□ -1.9
VPS38Q05919 MUB1YMR100W 1863 nt3.21□□□□□ -1.9
VPS38Q05919 ESC2YDR363W 1371 nt3.21□□□□□ -1.9
VPS38Q05919 21S_rRNA21S_rRNA 3296 nt3.21□□□□□ -1.9
VPS38Q05919 GYL1YMR192W 2163 nt3.2□□□□□ -1.9
VPS38Q05919 AIM25YJR100C 984 nt3.2□□□□□ -1.9
VPS38Q05919 YKR011CYKR011C 1062 nt3.2□□□□□ -1.9
VPS38Q05919 YBL039W-BYBL039W-B 180 nt3.2□□□□□ -1.9
VPS38Q05919 PDR17YNL264C 1053 nt3.2□□□□□ -1.9
VPS38Q05919 PFY1YOR122C 381 nt3.2□□□□□ -1.9
VPS38Q05919 YOR152CYOR152C 771 nt3.2□□□□□ -1.9
VPS38Q05919 MSH2YOL090W 2895 nt3.2□□□□□ -1.9
VPS38Q05919 FRE8YLR047C 2061 nt3.2□□□□□ -1.9
VPS38Q05919 YBR259WYBR259W 2067 nt3.2□□□□□ -1.9
VPS38Q05919 CEP3YMR168C 1827 nt3.19□□□□□ -1.9
VPS38Q05919 FAA2YER015W 2235 nt3.19□□□□□ -1.9
VPS38Q05919 YOR296WYOR296W 3870 nt3.19□□□□□ -1.9
VPS38Q05919 YDR248CYDR248C 582 nt3.19□□□□□ -1.9
VPS38Q05919 YER046W-AYER046W-A 330 nt3.19□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms