Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 MAK10YEL053C 2202 nt2.27□□□□□ -2.05
RKR1Q04781 TMA64YDR117C 1698 nt2.27□□□□□ -2.05
RKR1Q04781 PKR1YMR123W 369 nt2.27□□□□□ -2.05
RKR1Q04781 YPR077CYPR077C 372 nt2.27□□□□□ -2.05
RKR1Q04781 SIR3YLR442C 2937 nt2.27□□□□□ -2.05
RKR1Q04781 PLC1YPL268W 2610 nt2.26□□□□□ -2.05
RKR1Q04781 IRE1YHR079C 3348 nt2.26□□□□□ -2.05
RKR1Q04781 DEF1YKL054C 2217 nt2.26□□□□□ -2.05
RKR1Q04781 YER121WYER121W 345 nt2.26□□□□□ -2.05
RKR1Q04781 PEX11YOL147C 711 nt2.26□□□□□ -2.05
RKR1Q04781 YOR238WYOR238W 912 nt2.26□□□□□ -2.05
RKR1Q04781 PRM2YIL037C 1971 nt2.26□□□□□ -2.05
RKR1Q04781 RNR4YGR180C 1038 nt2.25□□□□□ -2.05
RKR1Q04781 YIL102CYIL102C 306 nt2.25□□□□□ -2.05
RKR1Q04781 PHO81YGR233C 3537 nt2.24□□□□□ -2.05
RKR1Q04781 SYC1YOR179C 567 nt2.24□□□□□ -2.05
RKR1Q04781 MCT1YOR221C 1083 nt2.24□□□□□ -2.05
RKR1Q04781 ACM1YPL267W 630 nt2.24□□□□□ -2.05
RKR1Q04781 YHR214C-BYHR214C-B 5382 nt2.24□□□□□ -2.05
RKR1Q04781 UTP20YBL004W 7482 nt2.24□□□□□ -2.05
RKR1Q04781 NNT1YLR285W 786 nt2.23□□□□□ -2.05
RKR1Q04781 YNL235CYNL235C 432 nt2.23□□□□□ -2.05
RKR1Q04781 VBA4YDR119W 2307 nt2.23□□□□□ -2.05
RKR1Q04781 CTH1YDR151C 978 nt2.23□□□□□ -2.05
RKR1Q04781 TPM2YIL138C 486 nt2.23□□□□□ -2.05
RKR1Q04781 HOS4YIL112W 3252 nt2.23□□□□□ -2.05
RKR1Q04781 PCK1YKR097W 1650 nt2.22□□□□□ -2.05
RKR1Q04781 ART10YLR392C 1557 nt2.22□□□□□ -2.05
RKR1Q04781 YJL119CYJL119C 324 nt2.22□□□□□ -2.05
RKR1Q04781 YRR1YOR162C 2433 nt2.22□□□□□ -2.05
RKR1Q04781 SPR28YDR218C 1272 nt2.21□□□□□ -2.06
RKR1Q04781 tH(GUG)E1tH(GUG)E1 72 nt2.21□□□□□ -2.06
RKR1Q04781 tH(GUG)E2tH(GUG)E2 72 nt2.21□□□□□ -2.06
RKR1Q04781 tH(GUG)G1tH(GUG)G1 72 nt2.21□□□□□ -2.06
RKR1Q04781 tH(GUG)G2tH(GUG)G2 72 nt2.21□□□□□ -2.06
RKR1Q04781 tH(GUG)HtH(GUG)H 72 nt2.21□□□□□ -2.06
RKR1Q04781 tH(GUG)KtH(GUG)K 72 nt2.21□□□□□ -2.06
RKR1Q04781 tH(GUG)MtH(GUG)M 72 nt2.21□□□□□ -2.06
RKR1Q04781 TAM41YGR046W 1158 nt2.21□□□□□ -2.06
RKR1Q04781 YLR462WYLR462W 609 nt2.21□□□□□ -2.06
RKR1Q04781 YBL096CYBL096C 309 nt2.21□□□□□ -2.06
RKR1Q04781 LTE1YAL024C 4308 nt2.21□□□□□ -2.06
RKR1Q04781 RPS25AYGR027C 327 nt2.2□□□□□ -2.06
RKR1Q04781 QCR9YGR183C 201 nt2.2□□□□□ -2.06
RKR1Q04781 YHR095WYHR095W 495 nt2.2□□□□□ -2.06
RKR1Q04781 SKN7YHR206W 1869 nt2.2□□□□□ -2.06
RKR1Q04781 YMR141CYMR141C 309 nt2.2□□□□□ -2.06
RKR1Q04781 EAF7YNL136W 1278 nt2.2□□□□□ -2.06
RKR1Q04781 YOR029WYOR029W 336 nt2.2□□□□□ -2.06
RKR1Q04781 VPS15YBR097W 4365 nt2.2□□□□□ -2.06
RKR1Q04781 YBP1YBR216C 2025 nt2.2□□□□□ -2.06
RKR1Q04781 NEL1YHR035W 1893 nt2.2□□□□□ -2.06
RKR1Q04781 IBA57YJR122W 1494 nt2.19□□□□□ -2.06
RKR1Q04781 RGA2YDR379W 3030 nt2.19□□□□□ -2.06
RKR1Q04781 tF(GAA)BtF(GAA)B 73 nt2.19□□□□□ -2.06
RKR1Q04781 tF(GAA)FtF(GAA)F 73 nt2.19□□□□□ -2.06
RKR1Q04781 tF(GAA)GtF(GAA)G 73 nt2.19□□□□□ -2.06
RKR1Q04781 tF(GAA)H1tF(GAA)H1 73 nt2.19□□□□□ -2.06
RKR1Q04781 tF(GAA)H2tF(GAA)H2 73 nt2.19□□□□□ -2.06
RKR1Q04781 tF(GAA)MtF(GAA)M 73 nt2.19□□□□□ -2.06
RKR1Q04781 tF(GAA)P1tF(GAA)P1 73 nt2.19□□□□□ -2.06
RKR1Q04781 tF(GAA)P2tF(GAA)P2 73 nt2.19□□□□□ -2.06
RKR1Q04781 SNO3YFL060C 669 nt2.19□□□□□ -2.06
RKR1Q04781 INA22YIR024C 651 nt2.19□□□□□ -2.06
RKR1Q04781 SNO2YNL334C 669 nt2.19□□□□□ -2.06
RKR1Q04781 PHO2YDL106C 1680 nt2.18□□□□□ -2.06
RKR1Q04781 UBP8YMR223W 1416 nt2.18□□□□□ -2.06
RKR1Q04781 COS4YFL062W 1140 nt2.18□□□□□ -2.06
RKR1Q04781 YCR099CYCR099C 468 nt2.17□□□□□ -2.06
RKR1Q04781 RPS1AYLR441C 768 nt2.17□□□□□ -2.06
RKR1Q04781 RIM13YMR154C 2184 nt2.17□□□□□ -2.06
RKR1Q04781 SPO75YLL005C 2607 nt2.17□□□□□ -2.06
RKR1Q04781 SMC1YFL008W 3678 nt2.16□□□□□ -2.06
RKR1Q04781 YLR428CYLR428C 345 nt2.16□□□□□ -2.06
RKR1Q04781 YBL073WYBL073W 312 nt2.16□□□□□ -2.06
RKR1Q04781 UFD2YDL190C 2886 nt2.16□□□□□ -2.06
RKR1Q04781 ROM2YLR371W 4071 nt2.16□□□□□ -2.06
RKR1Q04781 TUS1YLR425W 3924 nt2.16□□□□□ -2.06
RKR1Q04781 GRX3YDR098C 858 nt2.15□□□□□ -2.06
RKR1Q04781 HRI1YLR301W 735 nt2.15□□□□□ -2.06
RKR1Q04781 SNL1YIL016W 480 nt2.15□□□□□ -2.07
RKR1Q04781 AGC1YPR021C 2709 nt2.14□□□□□ -2.07
RKR1Q04781 PET309YLR067C 2898 nt2.14□□□□□ -2.07
RKR1Q04781 YKL071WYKL071W 771 nt2.14□□□□□ -2.07
RKR1Q04781 IRC21YMR073C 606 nt2.14□□□□□ -2.07
RKR1Q04781 SVS1YPL163C 783 nt2.14□□□□□ -2.07
RKR1Q04781 PAN2YGL094C 3348 nt2.14□□□□□ -2.07
RKR1Q04781 SAC3YDR159W 3906 nt2.14□□□□□ -2.07
RKR1Q04781 ALB1YJL122W 528 nt2.13□□□□□ -2.07
RKR1Q04781 RMP1YLR145W 606 nt2.13□□□□□ -2.07
RKR1Q04781 ESF2YNR054C 951 nt2.13□□□□□ -2.07
RKR1Q04781 MDM32YOR147W 1869 nt2.12□□□□□ -2.07
RKR1Q04781 YHR071C-AYHR071C-A 321 nt2.12□□□□□ -2.07
RKR1Q04781 CSE4YKL049C 690 nt2.12□□□□□ -2.07
RKR1Q04781 SEC65YML105C 822 nt2.12□□□□□ -2.07
RKR1Q04781 ATP11YNL315C 957 nt2.12□□□□□ -2.07
RKR1Q04781 MSS116YDR194C 1995 nt2.12□□□□□ -2.07
RKR1Q04781 UBR1YGR184C 5853 nt2.11□□□□□ -2.07
RKR1Q04781 TSR4YOL022C 1227 nt2.11□□□□□ -2.07
RKR1Q04781 SHE9YDR393W 1371 nt2.11□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms