Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 tL(CAA)DtL(CAA)D 82 nt3.8□□□□□ -1.8
CTK1Q03957 tL(CAA)G1tL(CAA)G1 82 nt3.8□□□□□ -1.8
CTK1Q03957 SUP54tL(CAA)G2 82 nt3.8□□□□□ -1.8
CTK1Q03957 tL(CAA)G3tL(CAA)G3 82 nt3.8□□□□□ -1.8
CTK1Q03957 tL(CAA)KtL(CAA)K 82 nt3.8□□□□□ -1.8
CTK1Q03957 tL(CAA)LtL(CAA)L 82 nt3.8□□□□□ -1.8
CTK1Q03957 tL(CAA)MtL(CAA)M 82 nt3.8□□□□□ -1.8
CTK1Q03957 tL(CAA)NtL(CAA)N 82 nt3.8□□□□□ -1.8
CTK1Q03957 MRM2YGL136C 963 nt3.8□□□□□ -1.8
CTK1Q03957 TPM2YIL138C 486 nt3.8□□□□□ -1.8
CTK1Q03957 YKL044WYKL044W 321 nt3.8□□□□□ -1.8
CTK1Q03957 IES3YLR052W 753 nt3.8□□□□□ -1.8
CTK1Q03957 SVS1YPL163C 783 nt3.8□□□□□ -1.8
CTK1Q03957 YPR050CYPR050C 414 nt3.8□□□□□ -1.8
CTK1Q03957 YPR136CYPR136C 513 nt3.8□□□□□ -1.8
CTK1Q03957 MNT4YNR059W 1743 nt3.8□□□□□ -1.8
CTK1Q03957 NUG1YER006W 1563 nt3.8□□□□□ -1.8
CTK1Q03957 HMG1YML075C 3165 nt3.79□□□□□ -1.8
CTK1Q03957 ADY4YLR227C 1482 nt3.79□□□□□ -1.8
CTK1Q03957 EXO70YJL085W 1872 nt3.79□□□□□ -1.8
CTK1Q03957 RSC3YDR303C 2658 nt3.79□□□□□ -1.8
CTK1Q03957 YOL019WYOL019W 1656 nt3.79□□□□□ -1.8
CTK1Q03957 snR68snR68 136 nt3.79□□□□□ -1.8
CTK1Q03957 OTU1YFL044C 906 nt3.79□□□□□ -1.8
CTK1Q03957 YGL152CYGL152C 678 nt3.79□□□□□ -1.8
CTK1Q03957 VMA10YHR039C-A 345 nt3.79□□□□□ -1.8
CTK1Q03957 MCR1YKL150W 909 nt3.79□□□□□ -1.8
CTK1Q03957 YML003WYML003W 873 nt3.79□□□□□ -1.8
CTK1Q03957 CTK3YML112W 891 nt3.79□□□□□ -1.8
CTK1Q03957 YPR174CYPR174C 666 nt3.79□□□□□ -1.8
CTK1Q03957 snR59snR59 78 nt3.78□□□□□ -1.8
CTK1Q03957 YCR064CYCR064C 411 nt3.78□□□□□ -1.8
CTK1Q03957 RPS29BYDL061C 171 nt3.78□□□□□ -1.8
CTK1Q03957 YER087C-AYER087C-A 552 nt3.78□□□□□ -1.8
CTK1Q03957 ECL1YGR146C 636 nt3.78□□□□□ -1.8
CTK1Q03957 YAP3YHL009C 993 nt3.78□□□□□ -1.8
CTK1Q03957 PCL5YHR071W 690 nt3.78□□□□□ -1.8
CTK1Q03957 YJR011CYJR011C 786 nt3.78□□□□□ -1.8
CTK1Q03957 YLR428CYLR428C 345 nt3.78□□□□□ -1.8
CTK1Q03957 YMR153C-AYMR153C-A 336 nt3.78□□□□□ -1.8
CTK1Q03957 YOL159CYOL159C 516 nt3.78□□□□□ -1.8
CTK1Q03957 YOR248WYOR248W 303 nt3.78□□□□□ -1.8
CTK1Q03957 AFT2YPL202C 1251 nt3.78□□□□□ -1.8
CTK1Q03957 PEP7YDR323C 1548 nt3.78□□□□□ -1.8
CTK1Q03957 HOS3YPL116W 2094 nt3.78□□□□□ -1.8
CTK1Q03957 DAP2YHR028C 2457 nt3.78□□□□□ -1.8
CTK1Q03957 DAL5YJR152W 1632 nt3.77□□□□□ -1.81
CTK1Q03957 MUD2YKL074C 1584 nt3.77□□□□□ -1.81
CTK1Q03957 EXO5YBR163W 1758 nt3.77□□□□□ -1.81
CTK1Q03957 SLK19YOR195W 2466 nt3.77□□□□□ -1.81
CTK1Q03957 ATG31YDR022C 591 nt3.77□□□□□ -1.81
CTK1Q03957 YGL039WYGL039W 1047 nt3.77□□□□□ -1.81
CTK1Q03957 DPH1YIL103W 1278 nt3.77□□□□□ -1.81
CTK1Q03957 HIS5YIL116W 1158 nt3.77□□□□□ -1.81
CTK1Q03957 TDA8YAL064C-A 381 nt3.77□□□□□ -1.81
CTK1Q03957 AFB1YLR040C 675 nt3.77□□□□□ -1.81
CTK1Q03957 YNL184CYNL184C 327 nt3.77□□□□□ -1.81
CTK1Q03957 VAM10YOR068C 345 nt3.77□□□□□ -1.81
CTK1Q03957 MSS18YPR134W 807 nt3.77□□□□□ -1.81
CTK1Q03957 MBA1YBR185C 837 nt3.77□□□□□ -1.81
CTK1Q03957 DPB3YBR278W 606 nt3.77□□□□□ -1.81
CTK1Q03957 RDH54YBR073W 2877 nt3.77□□□□□ -1.81
CTK1Q03957 VPS9YML097C 1356 nt3.76□□□□□ -1.81
CTK1Q03957 MDM36YPR083W 1740 nt3.76□□□□□ -1.81
CTK1Q03957 ARO80YDR421W 2853 nt3.76□□□□□ -1.81
CTK1Q03957 NDC80YIL144W 2076 nt3.76□□□□□ -1.81
CTK1Q03957 YCR045W-AYCR045W-A 351 nt3.76□□□□□ -1.81
CTK1Q03957 YDR320W-BYDR320W-B 138 nt3.76□□□□□ -1.81
CTK1Q03957 AIM29YKR074W 468 nt3.76□□□□□ -1.81
CTK1Q03957 DAD2YKR083C 402 nt3.76□□□□□ -1.81
CTK1Q03957 FLD1YLR404W 858 nt3.76□□□□□ -1.81
CTK1Q03957 RPL6BYLR448W 531 nt3.76□□□□□ -1.81
CTK1Q03957 YML084WYML084W 309 nt3.76□□□□□ -1.81
CTK1Q03957 FSH3YOR280C 801 nt3.76□□□□□ -1.81
CTK1Q03957 RPC40YPR110C 1008 nt3.76□□□□□ -1.81
CTK1Q03957 VMA1YDL185W 3216 nt3.76□□□□□ -1.81
CTK1Q03957 ECM22YLR228C 2445 nt3.76□□□□□ -1.81
CTK1Q03957 SWC4YGR002C 1431 nt3.76□□□□□ -1.81
CTK1Q03957 SRO7YPR032W 3102 nt3.76□□□□□ -1.81
CTK1Q03957 PSP1YDR505C 2526 nt3.76□□□□□ -1.81
CTK1Q03957 SHE4YOR035C 2370 nt3.75□□□□□ -1.81
CTK1Q03957 YGL108CYGL108C 423 nt3.75□□□□□ -1.81
CTK1Q03957 YLR224WYLR224W 1110 nt3.75□□□□□ -1.81
CTK1Q03957 ATX1YNL259C 222 nt3.75□□□□□ -1.81
CTK1Q03957 INO4YOL108C 456 nt3.75□□□□□ -1.81
CTK1Q03957 SRL1YOR247W 633 nt3.75□□□□□ -1.81
CTK1Q03957 YOR331CYOR331C 558 nt3.75□□□□□ -1.81
CTK1Q03957 YBR076C-AYBR076C-A 267 nt3.75□□□□□ -1.81
CTK1Q03957 ROD1YOR018W 2514 nt3.75□□□□□ -1.81
CTK1Q03957 RAD54YGL163C 2697 nt3.75□□□□□ -1.81
CTK1Q03957 RNA14YMR061W 2034 nt3.75□□□□□ -1.81
CTK1Q03957 GAL11YOL051W 3246 nt3.74□□□□□ -1.81
CTK1Q03957 BIK1YCL029C 1323 nt3.74□□□□□ -1.81
CTK1Q03957 HDA2YDR295C 2025 nt3.74□□□□□ -1.81
CTK1Q03957 YIL014C-AYIL014C-A 315 nt3.74□□□□□ -1.81
CTK1Q03957 YIL175WYIL175W 318 nt3.74□□□□□ -1.81
CTK1Q03957 YKL162C-AYKL162C-A 153 nt3.74□□□□□ -1.81
CTK1Q03957 ERG2YMR202W 669 nt3.74□□□□□ -1.81
CTK1Q03957 LOS1YKL205W 3303 nt3.74□□□□□ -1.81
CTK1Q03957 CDC14YFR028C 1656 nt3.74□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms