Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 GPX1P1-201ENST00000388829 606 ntBASIC20.69■□□□□ 0.9
CDK3Q00526 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.69■□□□□ 0.9
CDK3Q00526 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CDK3Q00526 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK3Q00526 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.69■□□□□ 0.9
CDK3Q00526 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK3Q00526 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK3Q00526 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK3Q00526 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK3Q00526 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK3Q00526 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK3Q00526 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK3Q00526 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK3Q00526 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK3Q00526 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK3Q00526 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK3Q00526 CYP2T1P-201ENST00000432607 1285 ntBASIC20.68■□□□□ 0.9
CDK3Q00526 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK3Q00526 AC104771.1-201ENST00000603335 964 ntBASIC20.68■□□□□ 0.9
CDK3Q00526 AL121832.2-201ENST00000610979 668 ntBASIC20.68■□□□□ 0.9
CDK3Q00526 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CDK3Q00526 AL109923.1-201ENST00000618799 583 ntBASIC20.68■□□□□ 0.9
CDK3Q00526 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDK3Q00526 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDK3Q00526 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDK3Q00526 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK3Q00526 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDK3Q00526 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK3Q00526 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK3Q00526 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK3Q00526 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK3Q00526 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK3Q00526 AC245052.3-201ENST00000450182 901 ntBASIC20.67■□□□□ 0.9
CDK3Q00526 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK3Q00526 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CDK3Q00526 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK3Q00526 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK3Q00526 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK3Q00526 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDK3Q00526 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK3Q00526 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK3Q00526 AC083906.2-201ENST00000511578 360 ntBASIC20.66■□□□□ 0.9
CDK3Q00526 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.66■□□□□ 0.9
CDK3Q00526 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK3Q00526 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK3Q00526 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK3Q00526 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK3Q00526 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.66■□□□□ 0.9
CDK3Q00526 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK3Q00526 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CDK3Q00526 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK3Q00526 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK3Q00526 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CDK3Q00526 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK3Q00526 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK3Q00526 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK3Q00526 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK3Q00526 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK3Q00526 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.65■□□□□ 0.9
CDK3Q00526 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.65■□□□□ 0.9
CDK3Q00526 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK3Q00526 AC133552.2-202ENST00000575694 574 ntBASIC20.65■□□□□ 0.9
CDK3Q00526 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.65■□□□□ 0.9
CDK3Q00526 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK3Q00526 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK3Q00526 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK3Q00526 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDK3Q00526 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDK3Q00526 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CDK3Q00526 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.64■□□□□ 0.9
CDK3Q00526 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDK3Q00526 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK3Q00526 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK3Q00526 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.64■□□□□ 0.89
CDK3Q00526 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK3Q00526 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK3Q00526 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK3Q00526 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CDK3Q00526 AL591742.1-201ENST00000604433 565 ntBASIC20.64■□□□□ 0.89
CDK3Q00526 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.64■□□□□ 0.89
CDK3Q00526 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDK3Q00526 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK3Q00526 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK3Q00526 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CDK3Q00526 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK3Q00526 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK3Q00526 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK3Q00526 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK3Q00526 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK3Q00526 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDK3Q00526 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK3Q00526 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK3Q00526 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK3Q00526 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
CDK3Q00526 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK3Q00526 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK3Q00526 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.63■□□□□ 0.89
CDK3Q00526 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK3Q00526 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK3Q00526 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms