Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.84■□□□□ 0.29
CX3CL1P78423 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.84■□□□□ 0.29
CX3CL1P78423 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.84■□□□□ 0.29
CX3CL1P78423 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CX3CL1P78423 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CX3CL1P78423 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CL1P78423 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CL1P78423 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CL1P78423 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CL1P78423 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CX3CL1P78423 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CL1P78423 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CX3CL1P78423 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CX3CL1P78423 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CX3CL1P78423 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CL1P78423 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.83■□□□□ 0.28
CX3CL1P78423 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.83■□□□□ 0.28
CX3CL1P78423 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CL1P78423 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CX3CL1P78423 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.83■□□□□ 0.28
CX3CL1P78423 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.83■□□□□ 0.28
CX3CL1P78423 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CX3CL1P78423 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.83■□□□□ 0.28
CX3CL1P78423 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.83■□□□□ 0.28
CX3CL1P78423 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CX3CL1P78423 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CX3CL1P78423 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.82■□□□□ 0.28
CX3CL1P78423 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CX3CL1P78423 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.82■□□□□ 0.28
CX3CL1P78423 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CX3CL1P78423 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.82■□□□□ 0.28
CX3CL1P78423 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CX3CL1P78423 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.82■□□□□ 0.28
CX3CL1P78423 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CX3CL1P78423 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.82■□□□□ 0.28
CX3CL1P78423 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CX3CL1P78423 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.82■□□□□ 0.28
CX3CL1P78423 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.82■□□□□ 0.28
CX3CL1P78423 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.82■□□□□ 0.28
CX3CL1P78423 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CX3CL1P78423 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.82■□□□□ 0.28
CX3CL1P78423 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CX3CL1P78423 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.82■□□□□ 0.28
CX3CL1P78423 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.82■□□□□ 0.28
CX3CL1P78423 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CX3CL1P78423 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CX3CL1P78423 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CX3CL1P78423 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CX3CL1P78423 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.81■□□□□ 0.28
CX3CL1P78423 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CX3CL1P78423 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.81■□□□□ 0.28
CX3CL1P78423 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.81■□□□□ 0.28
CX3CL1P78423 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.81■□□□□ 0.28
CX3CL1P78423 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CX3CL1P78423 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CX3CL1P78423 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CX3CL1P78423 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.8■□□□□ 0.28
CX3CL1P78423 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.8■□□□□ 0.28
CX3CL1P78423 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CX3CL1P78423 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 AC079140.4-201ENST00000507448 529 ntBASIC16.8■□□□□ 0.28
CX3CL1P78423 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.8■□□□□ 0.28
CX3CL1P78423 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CX3CL1P78423 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CL1P78423 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.79■□□□□ 0.28
CX3CL1P78423 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CX3CL1P78423 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms