Protein–RNA interactions for Protein: P56945

BCAR1, Breast cancer anti-estrogen resistance protein 1, humanhuman

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR1P56945 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
BCAR1P56945 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
BCAR1P56945 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.71■■□□□ 1.23
BCAR1P56945 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BCAR1P56945 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.71■■□□□ 1.23
BCAR1P56945 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BCAR1P56945 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.71■■□□□ 1.23
BCAR1P56945 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BCAR1P56945 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
BCAR1P56945 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.71■■□□□ 1.23
BCAR1P56945 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
BCAR1P56945 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
BCAR1P56945 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
BCAR1P56945 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
BCAR1P56945 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.7■■□□□ 1.22
BCAR1P56945 AC066615.1-201ENST00000640911 628 ntBASIC22.7■■□□□ 1.22
BCAR1P56945 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
BCAR1P56945 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
BCAR1P56945 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BCAR1P56945 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
BCAR1P56945 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BCAR1P56945 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BCAR1P56945 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
BCAR1P56945 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.69■■□□□ 1.22
BCAR1P56945 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BCAR1P56945 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
BCAR1P56945 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
BCAR1P56945 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.69■■□□□ 1.22
BCAR1P56945 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.69■■□□□ 1.22
BCAR1P56945 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.69■■□□□ 1.22
BCAR1P56945 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.69■■□□□ 1.22
BCAR1P56945 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
BCAR1P56945 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
BCAR1P56945 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.69■■□□□ 1.22
BCAR1P56945 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.69■■□□□ 1.22
BCAR1P56945 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.69■■□□□ 1.22
BCAR1P56945 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.69■■□□□ 1.22
BCAR1P56945 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.68■■□□□ 1.22
BCAR1P56945 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
BCAR1P56945 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.68■■□□□ 1.22
BCAR1P56945 KRT16P2-201ENST00000414673 1423 ntBASIC22.68■■□□□ 1.22
BCAR1P56945 RBM17P2-201ENST00000616397 1405 ntBASIC22.68■■□□□ 1.22
BCAR1P56945 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.68■■□□□ 1.22
BCAR1P56945 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCAR1P56945 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.68■■□□□ 1.22
BCAR1P56945 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.68■■□□□ 1.22
BCAR1P56945 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCAR1P56945 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.68■■□□□ 1.22
BCAR1P56945 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.68■■□□□ 1.22
BCAR1P56945 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.68■■□□□ 1.22
BCAR1P56945 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.68■■□□□ 1.22
BCAR1P56945 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.68■■□□□ 1.22
BCAR1P56945 AC080038.3-201ENST00000623346 1952 ntBASIC22.68■■□□□ 1.22
BCAR1P56945 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCAR1P56945 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
BCAR1P56945 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
BCAR1P56945 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.68■■□□□ 1.22
BCAR1P56945 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
BCAR1P56945 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.67■■□□□ 1.22
BCAR1P56945 RNA5SP413-201ENST00000516373 109 ntBASIC22.67■■□□□ 1.22
BCAR1P56945 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.67■■□□□ 1.22
BCAR1P56945 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 AC092118.2-201ENST00000613495 667 ntBASIC22.67■■□□□ 1.22
BCAR1P56945 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.67■■□□□ 1.22
BCAR1P56945 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
BCAR1P56945 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
BCAR1P56945 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
BCAR1P56945 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
BCAR1P56945 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
BCAR1P56945 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
BCAR1P56945 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
BCAR1P56945 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCAR1P56945 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.66■■□□□ 1.22
BCAR1P56945 BX276092.2-201ENST00000417668 665 ntBASIC22.66■■□□□ 1.22
BCAR1P56945 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
BCAR1P56945 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.66■■□□□ 1.22
BCAR1P56945 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
BCAR1P56945 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
BCAR1P56945 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.65■■□□□ 1.22
BCAR1P56945 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BCAR1P56945 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.65■■□□□ 1.22
BCAR1P56945 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BCAR1P56945 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BCAR1P56945 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.65■■□□□ 1.22
BCAR1P56945 AC061975.6-201ENST00000579045 1553 ntBASIC22.65■■□□□ 1.22
BCAR1P56945 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BCAR1P56945 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
BCAR1P56945 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
BCAR1P56945 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms