Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN12P56749 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLDN12P56749 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN12P56749 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 AC010525.1-201ENST00000585559 441 ntBASIC18.19■□□□□ 0.5
CLDN12P56749 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN12P56749 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 MIR6724-1-201ENST00000616420 92 ntBASIC18.19■□□□□ 0.5
CLDN12P56749 MIR6724-2-201ENST00000616483 92 ntBASIC18.19■□□□□ 0.5
CLDN12P56749 MIR6724-4-201ENST00000617390 92 ntBASIC18.19■□□□□ 0.5
CLDN12P56749 MIR6724-3-201ENST00000622482 92 ntBASIC18.19■□□□□ 0.5
CLDN12P56749 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN12P56749 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN12P56749 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN12P56749 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN12P56749 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN12P56749 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLDN12P56749 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN12P56749 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN12P56749 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 OR2I1P-207ENST00000453522 948 ntBASIC18.18■□□□□ 0.5
CLDN12P56749 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN12P56749 MIR3181-201ENST00000578512 73 ntBASIC18.18■□□□□ 0.5
CLDN12P56749 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLDN12P56749 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CLDN12P56749 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLDN12P56749 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLDN12P56749 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN12P56749 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CLDN12P56749 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN12P56749 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN12P56749 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN12P56749 AL034346.1-201ENST00000568244 1277 ntBASIC18.17■□□□□ 0.5
CLDN12P56749 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN12P56749 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDN12P56749 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN12P56749 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN12P56749 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN12P56749 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN12P56749 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLDN12P56749 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN12P56749 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN12P56749 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN12P56749 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CLDN12P56749 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN12P56749 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLDN12P56749 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN12P56749 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CLDN12P56749 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN12P56749 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN12P56749 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN12P56749 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN12P56749 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN12P56749 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN12P56749 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms