Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.62■□□□□ 0.09
CMC4P56277 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CMC4P56277 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.62■□□□□ 0.09
CMC4P56277 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 AC245052.3-201ENST00000450182 901 ntBASIC15.62■□□□□ 0.09
CMC4P56277 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.62■□□□□ 0.09
CMC4P56277 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.62■□□□□ 0.09
CMC4P56277 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.62■□□□□ 0.09
CMC4P56277 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CMC4P56277 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.62■□□□□ 0.09
CMC4P56277 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.62■□□□□ 0.09
CMC4P56277 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CMC4P56277 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.62■□□□□ 0.09
CMC4P56277 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CMC4P56277 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
CMC4P56277 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
CMC4P56277 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.61■□□□□ 0.09
CMC4P56277 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.61■□□□□ 0.09
CMC4P56277 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.61■□□□□ 0.09
CMC4P56277 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CMC4P56277 BID-214ENST00000617586 542 ntTSL 5 BASIC15.61■□□□□ 0.09
CMC4P56277 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.61■□□□□ 0.09
CMC4P56277 MYCNOS-205ENST00000641950 531 ntBASIC15.61■□□□□ 0.09
CMC4P56277 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CMC4P56277 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.6■□□□□ 0.09
CMC4P56277 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CMC4P56277 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.6■□□□□ 0.09
CMC4P56277 AC006015.1-201ENST00000429970 570 ntBASIC15.6■□□□□ 0.09
CMC4P56277 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.6■□□□□ 0.09
CMC4P56277 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CMC4P56277 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.6■□□□□ 0.09
CMC4P56277 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CMC4P56277 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 AC026471.6-201ENST00000622954 1905 ntBASIC15.6■□□□□ 0.09
CMC4P56277 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.6■□□□□ 0.09
CMC4P56277 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CMC4P56277 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CMC4P56277 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CMC4P56277 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.59■□□□□ 0.09
CMC4P56277 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CMC4P56277 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CMC4P56277 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.59■□□□□ 0.09
CMC4P56277 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CMC4P56277 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.59■□□□□ 0.09
CMC4P56277 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.59■□□□□ 0.09
CMC4P56277 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CMC4P56277 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.59■□□□□ 0.09
CMC4P56277 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.59■□□□□ 0.09
CMC4P56277 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CMC4P56277 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.59■□□□□ 0.09
CMC4P56277 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.59■□□□□ 0.09
CMC4P56277 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.59■□□□□ 0.09
CMC4P56277 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.59■□□□□ 0.09
CMC4P56277 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.59■□□□□ 0.09
CMC4P56277 AC243732.1-201ENST00000612648 864 ntBASIC15.59■□□□□ 0.09
CMC4P56277 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CMC4P56277 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CMC4P56277 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.59■□□□□ 0.09
CMC4P56277 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CMC4P56277 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CMC4P56277 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CMC4P56277 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CMC4P56277 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CMC4P56277 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CMC4P56277 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
CMC4P56277 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CMC4P56277 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms