Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXG1P55316 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.45■□□□□ 0.54
FOXG1P55316 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXG1P55316 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.45■□□□□ 0.54
FOXG1P55316 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXG1P55316 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
FOXG1P55316 RAP2CP1-201ENST00000605103 478 ntBASIC18.45■□□□□ 0.54
FOXG1P55316 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXG1P55316 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXG1P55316 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
FOXG1P55316 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXG1P55316 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXG1P55316 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXG1P55316 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXG1P55316 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
FOXG1P55316 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXG1P55316 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXG1P55316 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
FOXG1P55316 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXG1P55316 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXG1P55316 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
FOXG1P55316 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
FOXG1P55316 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXG1P55316 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXG1P55316 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FOXG1P55316 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
FOXG1P55316 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXG1P55316 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXG1P55316 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXG1P55316 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXG1P55316 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXG1P55316 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXG1P55316 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXG1P55316 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXG1P55316 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.43■□□□□ 0.54
FOXG1P55316 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXG1P55316 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXG1P55316 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
FOXG1P55316 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
FOXG1P55316 Z98882.1-201ENST00000622160 2253 ntBASIC18.43■□□□□ 0.54
FOXG1P55316 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.42■□□□□ 0.54
FOXG1P55316 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 SLC7A5P1-201ENST00000568957 537 ntBASIC18.42■□□□□ 0.54
FOXG1P55316 AC010536.3-201ENST00000620306 533 ntBASIC18.42■□□□□ 0.54
FOXG1P55316 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXG1P55316 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FOXG1P55316 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXG1P55316 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXG1P55316 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXG1P55316 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXG1P55316 KRT16P2-201ENST00000414673 1423 ntBASIC18.41■□□□□ 0.54
FOXG1P55316 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXG1P55316 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXG1P55316 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXG1P55316 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXG1P55316 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXG1P55316 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXG1P55316 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXG1P55316 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXG1P55316 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXG1P55316 AC120498.10-201ENST00000621827 505 ntBASIC18.41■□□□□ 0.54
FOXG1P55316 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXG1P55316 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.41■□□□□ 0.54
FOXG1P55316 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXG1P55316 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXG1P55316 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXG1P55316 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXG1P55316 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXG1P55316 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXG1P55316 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXG1P55316 CNN2P6-201ENST00000439038 900 ntBASIC18.4■□□□□ 0.54
FOXG1P55316 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
FOXG1P55316 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXG1P55316 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
FOXG1P55316 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXG1P55316 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXG1P55316 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXG1P55316 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms