Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CDH4P55283 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH4P55283 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.5■■□□□ 1.03
CDH4P55283 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDH4P55283 AC026185.1-201ENST00000445748 174 ntBASIC21.5■■□□□ 1.03
CDH4P55283 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.5■■□□□ 1.03
CDH4P55283 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH4P55283 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.5■■□□□ 1.03
CDH4P55283 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.5■■□□□ 1.03
CDH4P55283 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH4P55283 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.5■■□□□ 1.03
CDH4P55283 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH4P55283 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH4P55283 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH4P55283 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDH4P55283 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH4P55283 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH4P55283 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDH4P55283 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CDH4P55283 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.49■■□□□ 1.03
CDH4P55283 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.49■■□□□ 1.03
CDH4P55283 AC243732.1-201ENST00000612648 864 ntBASIC21.49■■□□□ 1.03
CDH4P55283 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH4P55283 RBM17P2-201ENST00000616397 1405 ntBASIC21.48■■□□□ 1.03
CDH4P55283 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.48■■□□□ 1.03
CDH4P55283 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH4P55283 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH4P55283 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.48■■□□□ 1.03
CDH4P55283 AC013268.1-206ENST00000638368 961 ntBASIC21.48■■□□□ 1.03
CDH4P55283 AC112229.1-201ENST00000639295 961 ntBASIC21.48■■□□□ 1.03
CDH4P55283 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH4P55283 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH4P55283 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDH4P55283 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH4P55283 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH4P55283 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH4P55283 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH4P55283 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH4P55283 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH4P55283 AC007322.1-201ENST00000426983 750 ntBASIC21.47■■□□□ 1.03
CDH4P55283 CNN2P6-201ENST00000439038 900 ntBASIC21.47■■□□□ 1.03
CDH4P55283 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH4P55283 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CDH4P55283 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH4P55283 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH4P55283 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH4P55283 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH4P55283 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH4P55283 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH4P55283 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH4P55283 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH4P55283 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH4P55283 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH4P55283 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH4P55283 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CDH4P55283 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH4P55283 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH4P55283 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.46■■□□□ 1.03
CDH4P55283 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CDH4P55283 AC245052.3-201ENST00000450182 901 ntBASIC21.46■■□□□ 1.03
CDH4P55283 AC007322.4-201ENST00000509611 723 ntBASIC21.46■■□□□ 1.03
CDH4P55283 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH4P55283 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH4P55283 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH4P55283 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH4P55283 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH4P55283 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH4P55283 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CDH4P55283 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH4P55283 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH4P55283 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH4P55283 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CDH4P55283 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH4P55283 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.45■■□□□ 1.02
CDH4P55283 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDH4P55283 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CDH4P55283 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.45■■□□□ 1.02
CDH4P55283 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH4P55283 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH4P55283 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH4P55283 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH4P55283 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH4P55283 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH4P55283 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDH4P55283 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH4P55283 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH4P55283 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH4P55283 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.45■■□□□ 1.02
CDH4P55283 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
CDH4P55283 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH4P55283 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms