Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC245052.3-201ENST00000450182 901 ntBASIC20.23■□□□□ 0.83
EPHA4P54764 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.23■□□□□ 0.83
EPHA4P54764 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHA4P54764 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.23■□□□□ 0.83
EPHA4P54764 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHA4P54764 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHA4P54764 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHA4P54764 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA4P54764 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHA4P54764 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.22■□□□□ 0.83
EPHA4P54764 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHA4P54764 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA4P54764 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHA4P54764 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
EPHA4P54764 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHA4P54764 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA4P54764 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.22■□□□□ 0.83
EPHA4P54764 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EPHA4P54764 MIR4758-201ENST00000577688 71 ntBASIC20.22■□□□□ 0.83
EPHA4P54764 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
EPHA4P54764 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.22■□□□□ 0.83
EPHA4P54764 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.22■□□□□ 0.83
EPHA4P54764 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.22■□□□□ 0.83
EPHA4P54764 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
EPHA4P54764 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.22■□□□□ 0.83
EPHA4P54764 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
EPHA4P54764 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.21■□□□□ 0.83
EPHA4P54764 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.21■□□□□ 0.83
EPHA4P54764 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.21■□□□□ 0.83
EPHA4P54764 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA4P54764 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA4P54764 AC016405.3-201ENST00000607710 860 ntBASIC20.21■□□□□ 0.83
EPHA4P54764 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.21■□□□□ 0.83
EPHA4P54764 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA4P54764 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
EPHA4P54764 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA4P54764 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
EPHA4P54764 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EPHA4P54764 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHA4P54764 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
EPHA4P54764 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
EPHA4P54764 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHA4P54764 RARRES2P4-201ENST00000514074 484 ntBASIC20.2■□□□□ 0.82
EPHA4P54764 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.2■□□□□ 0.82
EPHA4P54764 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.2■□□□□ 0.82
EPHA4P54764 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
EPHA4P54764 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.2■□□□□ 0.82
EPHA4P54764 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EPHA4P54764 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHA4P54764 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHA4P54764 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
EPHA4P54764 MIPEPP3-201ENST00000412105 444 ntBASIC20.19■□□□□ 0.82
EPHA4P54764 AC093787.1-201ENST00000450396 207 ntBASIC20.19■□□□□ 0.82
EPHA4P54764 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.19■□□□□ 0.82
EPHA4P54764 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.19■□□□□ 0.82
EPHA4P54764 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EPHA4P54764 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EPHA4P54764 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.19■□□□□ 0.82
EPHA4P54764 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
EPHA4P54764 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA4P54764 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.18■□□□□ 0.82
EPHA4P54764 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA4P54764 CD99P1-205ENST00000527459 561 ntBASIC20.18■□□□□ 0.82
EPHA4P54764 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.18■□□□□ 0.82
EPHA4P54764 KRT18P6-201ENST00000555540 1265 ntBASIC20.18■□□□□ 0.82
EPHA4P54764 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA4P54764 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.18■□□□□ 0.82
EPHA4P54764 AC092118.2-201ENST00000613495 667 ntBASIC20.18■□□□□ 0.82
EPHA4P54764 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA4P54764 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA4P54764 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA4P54764 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EPHA4P54764 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.18■□□□□ 0.82
EPHA4P54764 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms