Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YDR209CYDR209C 414 nt2.66□□□□□ -1.98
YNL040WP53960 GIC2YDR309C 1152 nt2.66□□□□□ -1.98
YNL040WP53960 MMF1YIL051C 438 nt2.66□□□□□ -1.98
YNL040WP53960 YJR020WYJR020W 333 nt2.66□□□□□ -1.98
YNL040WP53960 YAL034C-BYAL034C-B 354 nt2.66□□□□□ -1.98
YNL040WP53960 MET14YKL001C 609 nt2.66□□□□□ -1.98
YNL040WP53960 BOS1YLR078C 735 nt2.66□□□□□ -1.98
YNL040WP53960 SSN8YNL025C 972 nt2.66□□□□□ -1.98
YNL040WP53960 PFY1YOR122C 381 nt2.66□□□□□ -1.98
YNL040WP53960 TPO5YKL174C 1857 nt2.66□□□□□ -1.98
YNL040WP53960 ENP2YGR145W 2124 nt2.65□□□□□ -1.98
YNL040WP53960 PRE1YER012W 597 nt2.65□□□□□ -1.99
YNL040WP53960 SMX2YFL017W-A 234 nt2.65□□□□□ -1.99
YNL040WP53960 YFR010W-AYFR010W-A 189 nt2.65□□□□□ -1.99
YNL040WP53960 YHR032W-AYHR032W-A 180 nt2.65□□□□□ -1.99
YNL040WP53960 HTD2YHR067W 843 nt2.65□□□□□ -1.99
YNL040WP53960 PEX18YHR160C 852 nt2.65□□□□□ -1.99
YNL040WP53960 VMA5YKL080W 1179 nt2.65□□□□□ -1.99
YNL040WP53960 YLL037WYLL037W 381 nt2.65□□□□□ -1.99
YNL040WP53960 ENV10YLR065C 546 nt2.65□□□□□ -1.99
YNL040WP53960 NNT1YLR285W 786 nt2.65□□□□□ -1.99
YNL040WP53960 FYV6YNL133C 522 nt2.65□□□□□ -1.99
YNL040WP53960 UFE1YOR075W 1041 nt2.65□□□□□ -1.99
YNL040WP53960 MRD1YPR112C 2664 nt2.65□□□□□ -1.99
YNL040WP53960 PDR1YGL013C 3207 nt2.64□□□□□ -1.99
YNL040WP53960 SMC2YFR031C 3513 nt2.64□□□□□ -1.99
YNL040WP53960 FKS3YMR306W 5358 nt2.64□□□□□ -1.99
YNL040WP53960 YDR131CYDR131C 1671 nt2.64□□□□□ -1.99
YNL040WP53960 YML094C-AYML094C-A 402 nt2.64□□□□□ -1.99
YNL040WP53960 YBR013CYBR013C 390 nt2.64□□□□□ -1.99
YNL040WP53960 APD1YBR151W 951 nt2.64□□□□□ -1.99
YNL040WP53960 YBR201C-AYBR201C-A 204 nt2.64□□□□□ -1.99
YNL040WP53960 DNA2YHR164C 4569 nt2.64□□□□□ -1.99
YNL040WP53960 AI2Q0055 2565 nt2.64□□□□□ -1.99
YNL040WP53960 MUS81YDR386W 1899 nt2.64□□□□□ -1.99
YNL040WP53960 EAP1YKL204W 1899 nt2.64□□□□□ -1.99
YNL040WP53960 PEX6YNL329C 3093 nt2.64□□□□□ -1.99
YNL040WP53960 CIK1YMR198W 1785 nt2.64□□□□□ -1.99
YNL040WP53960 APC5YOR249C 2058 nt2.64□□□□□ -1.99
YNL040WP53960 PTP3YER075C 2787 nt2.63□□□□□ -1.99
YNL040WP53960 ARP8YOR141C 2646 nt2.63□□□□□ -1.99
YNL040WP53960 DSE1YER124C 1722 nt2.63□□□□□ -1.99
YNL040WP53960 BRR6YGL247W 594 nt2.63□□□□□ -1.99
YNL040WP53960 YGR073CYGR073C 372 nt2.63□□□□□ -1.99
YNL040WP53960 EFG1YGR271C-A 702 nt2.63□□□□□ -1.99
YNL040WP53960 YHR213WYHR213W 597 nt2.63□□□□□ -1.99
YNL040WP53960 VPS25YJR102C 609 nt2.63□□□□□ -1.99
YNL040WP53960 RPF2YKR081C 1035 nt2.63□□□□□ -1.99
YNL040WP53960 YAR062WYAR062W 597 nt2.63□□□□□ -1.99
YNL040WP53960 GRX7YBR014C 612 nt2.63□□□□□ -1.99
YNL040WP53960 YOR203WYOR203W 354 nt2.63□□□□□ -1.99
YNL040WP53960 RPB8YOR224C 441 nt2.63□□□□□ -1.99
YNL040WP53960 CCL1YPR025C 1182 nt2.63□□□□□ -1.99
YNL040WP53960 CTP1YBR291C 900 nt2.63□□□□□ -1.99
YNL040WP53960 BUB1YGR188C 3066 nt2.62□□□□□ -1.99
YNL040WP53960 snR68snR68 136 nt2.62□□□□□ -1.99
YNL040WP53960 snR70snR70 164 nt2.62□□□□□ -1.99
YNL040WP53960 YPR1YDR368W 939 nt2.62□□□□□ -1.99
YNL040WP53960 RMT2YDR465C 1239 nt2.62□□□□□ -1.99
YNL040WP53960 RGI1YER067W 486 nt2.62□□□□□ -1.99
YNL040WP53960 YER079C-AYER079C-A 339 nt2.62□□□□□ -1.99
YNL040WP53960 ECM13YBL043W 774 nt2.62□□□□□ -1.99
YNL040WP53960 TPT1YOL102C 693 nt2.62□□□□□ -1.99
YNL040WP53960 ERV15YBR210W 429 nt2.62□□□□□ -1.99
YNL040WP53960 snR44snR44 211 nt2.62□□□□□ -1.99
YNL040WP53960 SLY41YOR307C 1362 nt2.61□□□□□ -1.99
YNL040WP53960 YLR001CYLR001C 2589 nt2.61□□□□□ -1.99
YNL040WP53960 SHR3YDL212W 633 nt2.61□□□□□ -1.99
YNL040WP53960 PET100YDR079W 336 nt2.61□□□□□ -1.99
YNL040WP53960 YIL054WYIL054W 318 nt2.61□□□□□ -1.99
YNL040WP53960 RPA12YJR063W 378 nt2.61□□□□□ -1.99
YNL040WP53960 YLR076CYLR076C 423 nt2.61□□□□□ -1.99
YNL040WP53960 YBL062WYBL062W 381 nt2.61□□□□□ -1.99
YNL040WP53960 FMP41YNL168C 780 nt2.61□□□□□ -1.99
YNL040WP53960 AFT2YPL202C 1251 nt2.61□□□□□ -1.99
YNL040WP53960 DPB3YBR278W 606 nt2.61□□□□□ -1.99
YNL040WP53960 GCD2YGR083C 1956 nt2.61□□□□□ -1.99
YNL040WP53960 ESC1YMR219W 4977 nt2.6□□□□□ -1.99
YNL040WP53960 ARP9YMR033W 1404 nt2.6□□□□□ -1.99
YNL040WP53960 DIA2YOR080W 2199 nt2.6□□□□□ -1.99
YNL040WP53960 YKR078WYKR078W 1758 nt2.6□□□□□ -1.99
YNL040WP53960 FMN1YDR236C 657 nt2.6□□□□□ -1.99
YNL040WP53960 MEI4YER044C-A 1227 nt2.6□□□□□ -1.99
YNL040WP53960 RTT105YER104W 627 nt2.6□□□□□ -1.99
YNL040WP53960 YGR270C-AYGR270C-A 219 nt2.6□□□□□ -1.99
YNL040WP53960 YHR182C-AYHR182C-A 474 nt2.6□□□□□ -1.99
YNL040WP53960 PSF2YJL072C 642 nt2.6□□□□□ -1.99
YNL040WP53960 GLG2YJL137C 1143 nt2.6□□□□□ -1.99
YNL040WP53960 YLR198CYLR198C 360 nt2.6□□□□□ -1.99
YNL040WP53960 TMA10YLR327C 261 nt2.6□□□□□ -1.99
YNL040WP53960 YMR099CYMR099C 894 nt2.6□□□□□ -1.99
YNL040WP53960 YOL114CYOL114C 609 nt2.6□□□□□ -1.99
YNL040WP53960 YOR055WYOR055W 435 nt2.6□□□□□ -1.99
YNL040WP53960 RRD2YPL152W 1077 nt2.6□□□□□ -1.99
YNL040WP53960 ATP22YDR350C 2055 nt2.6□□□□□ -1.99
YNL040WP53960 YBR259WYBR259W 2067 nt2.6□□□□□ -1.99
YNL040WP53960 BI3Q0115 1554 nt2.6□□□□□ -1.99
YNL040WP53960 YDR098C-BYDR098C-B 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YDR210C-DYDR210C-D 5268 nt2.6□□□□□ -1.99
YNL040WP53960 YDR316W-BYDR316W-B 5268 nt2.6□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms