Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 SFG1YOR315W 1041 nt3.17□□□□□ -1.9
RPT4P53549 YPL107WYPL107W 747 nt3.17□□□□□ -1.9
RPT4P53549 CUP9YPL177C 921 nt3.17□□□□□ -1.9
RPT4P53549 APD1YBR151W 951 nt3.17□□□□□ -1.9
RPT4P53549 PDR3YBL005W 2931 nt3.17□□□□□ -1.9
RPT4P53549 YJL132WYJL132W 2253 nt3.17□□□□□ -1.9
RPT4P53549 SLN1YIL147C 3663 nt3.16□□□□□ -1.9
RPT4P53549 YDL050CYDL050C 372 nt3.16□□□□□ -1.9
RPT4P53549 SEC4YFL005W 648 nt3.16□□□□□ -1.9
RPT4P53549 COG7YGL005C 840 nt3.16□□□□□ -1.9
RPT4P53549 YGR121W-AYGR121W-A 216 nt3.16□□□□□ -1.9
RPT4P53549 YHR032W-AYHR032W-A 180 nt3.16□□□□□ -1.9
RPT4P53549 TSR4YOL022C 1227 nt3.16□□□□□ -1.9
RPT4P53549 RPB8YOR224C 441 nt3.16□□□□□ -1.9
RPT4P53549 YBR201C-AYBR201C-A 204 nt3.16□□□□□ -1.9
RPT4P53549 DPB3YBR278W 606 nt3.16□□□□□ -1.9
RPT4P53549 POL2YNL262W 6669 nt3.15□□□□□ -1.9
RPT4P53549 RED1YLR263W 2484 nt3.15□□□□□ -1.9
RPT4P53549 GYP7YDL234C 2241 nt3.15□□□□□ -1.9
RPT4P53549 ITC1YGL133W 3795 nt3.15□□□□□ -1.9
RPT4P53549 TVP15YDR100W 432 nt3.15□□□□□ -1.91
RPT4P53549 RRT13YER066W 558 nt3.15□□□□□ -1.91
RPT4P53549 YKL065W-AYKL065W-A 222 nt3.15□□□□□ -1.91
RPT4P53549 RSM19YNR037C 276 nt3.15□□□□□ -1.91
RPT4P53549 TSC11YER093C 4293 nt3.15□□□□□ -1.91
RPT4P53549 REG1YDR028C 3045 nt3.15□□□□□ -1.91
RPT4P53549 STP2YHR006W 1626 nt3.15□□□□□ -1.91
RPT4P53549 TCP1YDR212W 1680 nt3.14□□□□□ -1.91
RPT4P53549 GUK1YDR454C 564 nt3.14□□□□□ -1.91
RPT4P53549 PRE4YFR050C 801 nt3.14□□□□□ -1.91
RPT4P53549 SDP1YIL113W 630 nt3.14□□□□□ -1.91
RPT4P53549 RPA12YJR063W 378 nt3.14□□□□□ -1.91
RPT4P53549 PHD1YKL043W 1101 nt3.14□□□□□ -1.91
RPT4P53549 YOL107WYOL107W 1029 nt3.14□□□□□ -1.91
RPT4P53549 YIL082W-AYIL082W-A 4497 nt3.14□□□□□ -1.91
RPT4P53549 YGL176CYGL176C 1665 nt3.14□□□□□ -1.91
RPT4P53549 ERG11YHR007C 1593 nt3.13□□□□□ -1.91
RPT4P53549 YFH7YFR007W 1062 nt3.13□□□□□ -1.91
RPT4P53549 GET1YGL020C 708 nt3.13□□□□□ -1.91
RPT4P53549 YGL230CYGL230C 444 nt3.13□□□□□ -1.91
RPT4P53549 COX6YHR051W 447 nt3.13□□□□□ -1.91
RPT4P53549 YKR011CYKR011C 1062 nt3.13□□□□□ -1.91
RPT4P53549 SAS5YOR213C 747 nt3.13□□□□□ -1.91
RPT4P53549 YBR090CYBR090C 369 nt3.13□□□□□ -1.91
RPT4P53549 MSH2YOL090W 2895 nt3.13□□□□□ -1.91
RPT4P53549 ROM1YGR070W 3468 nt3.13□□□□□ -1.91
RPT4P53549 PIG2YIL045W 1617 nt3.12□□□□□ -1.91
RPT4P53549 TFC4YGR047C 3078 nt3.12□□□□□ -1.91
RPT4P53549 HTB1YDR224C 396 nt3.12□□□□□ -1.91
RPT4P53549 MAM1YER106W 909 nt3.12□□□□□ -1.91
RPT4P53549 CTK2YJL006C 972 nt3.12□□□□□ -1.91
RPT4P53549 YKR033CYKR033C 426 nt3.12□□□□□ -1.91
RPT4P53549 MPS1YDL028C 2295 nt3.12□□□□□ -1.91
RPT4P53549 FKS3YMR306W 5358 nt3.11□□□□□ -1.91
RPT4P53549 LCB4YOR171C 1875 nt3.11□□□□□ -1.91
RPT4P53549 MDV1YJL112W 2145 nt3.11□□□□□ -1.91
RPT4P53549 ERP3YDL018C 678 nt3.11□□□□□ -1.91
RPT4P53549 SEC28YIL076W 891 nt3.11□□□□□ -1.91
RPT4P53549 YJL114WYJL114W 681 nt3.11□□□□□ -1.91
RPT4P53549 OST6YML019W 999 nt3.11□□□□□ -1.91
RPT4P53549 YNL276CYNL276C 396 nt3.11□□□□□ -1.91
RPT4P53549 TPT1YOL102C 693 nt3.11□□□□□ -1.91
RPT4P53549 YOL114CYOL114C 609 nt3.11□□□□□ -1.91
RPT4P53549 LTP1YPR073C 486 nt3.11□□□□□ -1.91
RPT4P53549 SRP68YPL243W 1800 nt3.11□□□□□ -1.91
RPT4P53549 YJL049WYJL049W 1353 nt3.11□□□□□ -1.91
RPT4P53549 YCG1YDR325W 3108 nt3.1□□□□□ -1.91
RPT4P53549 TPO5YKL174C 1857 nt3.1□□□□□ -1.91
RPT4P53549 RPL13AYDL082W 600 nt3.1□□□□□ -1.91
RPT4P53549 YPD1YDL235C 504 nt3.1□□□□□ -1.91
RPT4P53549 CWC23YGL128C 852 nt3.1□□□□□ -1.91
RPT4P53549 MIG2YGL209W 1149 nt3.1□□□□□ -1.91
RPT4P53549 LST7YGR057C 729 nt3.1□□□□□ -1.91
RPT4P53549 YJL047C-AYJL047C-A 135 nt3.1□□□□□ -1.91
RPT4P53549 SUI2YJR007W 915 nt3.1□□□□□ -1.91
RPT4P53549 YLR307C-AYLR307C-A 264 nt3.1□□□□□ -1.91
RPT4P53549 PFY1YOR122C 381 nt3.1□□□□□ -1.91
RPT4P53549 RPL20BYOR312C 519 nt3.1□□□□□ -1.91
RPT4P53549 BTS1YPL069C 1008 nt3.1□□□□□ -1.91
RPT4P53549 TRM82YDR165W 1335 nt3.1□□□□□ -1.91
RPT4P53549 YNL011CYNL011C 1335 nt3.1□□□□□ -1.91
RPT4P53549 CSR2YPR030W 3366 nt3.1□□□□□ -1.91
RPT4P53549 IOC3YFR013W 2364 nt3.1□□□□□ -1.91
RPT4P53549 IKI3YLR384C 4050 nt3.1□□□□□ -1.91
RPT4P53549 MAK21YDR060W 3078 nt3.09□□□□□ -1.91
RPT4P53549 UTP5YDR398W 1932 nt3.09□□□□□ -1.91
RPT4P53549 SAG1YJR004C 1953 nt3.09□□□□□ -1.91
RPT4P53549 CBS2YDR197W 1170 nt3.09□□□□□ -1.91
RPT4P53549 RTT105YER104W 627 nt3.09□□□□□ -1.91
RPT4P53549 GPX1YKL026C 504 nt3.09□□□□□ -1.91
RPT4P53549 EMC6YLL014W 327 nt3.09□□□□□ -1.91
RPT4P53549 RPS30AYLR287C-A 192 nt3.09□□□□□ -1.91
RPT4P53549 CCW14YLR390W-A 717 nt3.09□□□□□ -1.91
RPT4P53549 SSN8YNL025C 972 nt3.09□□□□□ -1.91
RPT4P53549 VPS3YDR495C 3036 nt3.09□□□□□ -1.91
RPT4P53549 YDR170W-AYDR170W-A 1323 nt3.09□□□□□ -1.91
RPT4P53549 YBL005W-AYBL005W-A 1323 nt3.09□□□□□ -1.91
RPT4P53549 YMR046CYMR046C 1323 nt3.09□□□□□ -1.91
RPT4P53549 YNL284C-AYNL284C-A 1323 nt3.09□□□□□ -1.91
RPT4P53549 STI1YOR027W 1770 nt3.09□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 22 ms