Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CLCNKAP51800 AC007322.1-201ENST00000426983 750 ntBASIC20.58■□□□□ 0.89
CLCNKAP51800 CROCCP5-201ENST00000436658 830 ntBASIC20.58■□□□□ 0.89
CLCNKAP51800 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.58■□□□□ 0.89
CLCNKAP51800 AC007322.4-201ENST00000509611 723 ntBASIC20.58■□□□□ 0.89
CLCNKAP51800 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.58■□□□□ 0.89
CLCNKAP51800 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.58■□□□□ 0.89
CLCNKAP51800 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.58■□□□□ 0.89
CLCNKAP51800 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCNKAP51800 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CLCNKAP51800 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCNKAP51800 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCNKAP51800 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCNKAP51800 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
CLCNKAP51800 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLCNKAP51800 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLCNKAP51800 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKAP51800 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKAP51800 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
CLCNKAP51800 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
CLCNKAP51800 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCNKAP51800 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CLCNKAP51800 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKAP51800 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKAP51800 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.57■□□□□ 0.88
CLCNKAP51800 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCNKAP51800 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCNKAP51800 CNN2P6-201ENST00000439038 900 ntBASIC20.57■□□□□ 0.88
CLCNKAP51800 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKAP51800 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKAP51800 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCNKAP51800 AC243732.1-201ENST00000612648 864 ntBASIC20.57■□□□□ 0.88
CLCNKAP51800 AC013268.1-206ENST00000638368 961 ntBASIC20.57■□□□□ 0.88
CLCNKAP51800 AC112229.1-201ENST00000639295 961 ntBASIC20.57■□□□□ 0.88
CLCNKAP51800 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKAP51800 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKAP51800 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKAP51800 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCNKAP51800 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.57■□□□□ 0.88
CLCNKAP51800 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.57■□□□□ 0.88
CLCNKAP51800 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKAP51800 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKAP51800 FBXW4P1-201ENST00000426721 2239 ntBASIC20.56■□□□□ 0.88
CLCNKAP51800 ID1-201ENST00000376105 1233 ntBASIC20.56■□□□□ 0.88
CLCNKAP51800 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.56■□□□□ 0.88
CLCNKAP51800 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.56■□□□□ 0.88
CLCNKAP51800 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKAP51800 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKAP51800 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKAP51800 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.56■□□□□ 0.88
CLCNKAP51800 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCNKAP51800 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCNKAP51800 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCNKAP51800 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCNKAP51800 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCNKAP51800 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCNKAP51800 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.55■□□□□ 0.88
CLCNKAP51800 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCNKAP51800 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLCNKAP51800 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCNKAP51800 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLCNKAP51800 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CLCNKAP51800 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCNKAP51800 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CLCNKAP51800 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CLCNKAP51800 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCNKAP51800 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCNKAP51800 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCNKAP51800 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCNKAP51800 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCNKAP51800 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCNKAP51800 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLCNKAP51800 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCNKAP51800 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCNKAP51800 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCNKAP51800 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCNKAP51800 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCNKAP51800 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCNKAP51800 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CLCNKAP51800 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.54■□□□□ 0.88
CLCNKAP51800 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCNKAP51800 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCNKAP51800 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCNKAP51800 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCNKAP51800 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLCNKAP51800 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.53■□□□□ 0.88
CLCNKAP51800 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCNKAP51800 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCNKAP51800 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCNKAP51800 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCNKAP51800 NCF1B-203ENST00000435988 1254 ntBASIC20.53■□□□□ 0.88
CLCNKAP51800 AC006970.2-201ENST00000450065 779 ntBASIC20.53■□□□□ 0.88
CLCNKAP51800 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms