Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB28P51157 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB28P51157 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAB28P51157 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB28P51157 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.31■□□□□ 0.84
RAB28P51157 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB28P51157 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB28P51157 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RAB28P51157 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB28P51157 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB28P51157 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAB28P51157 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB28P51157 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB28P51157 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.3■□□□□ 0.84
RAB28P51157 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB28P51157 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB28P51157 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB28P51157 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB28P51157 Z98882.1-201ENST00000622160 2253 ntBASIC20.29■□□□□ 0.84
RAB28P51157 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RAB28P51157 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB28P51157 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.29■□□□□ 0.84
RAB28P51157 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB28P51157 MFSD11-216ENST00000590393 1141 ntBASIC20.29■□□□□ 0.84
RAB28P51157 AC011767.1-201ENST00000617410 1153 ntBASIC20.29■□□□□ 0.84
RAB28P51157 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB28P51157 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RAB28P51157 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB28P51157 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB28P51157 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB28P51157 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
RAB28P51157 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB28P51157 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RAB28P51157 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB28P51157 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB28P51157 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB28P51157 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
RAB28P51157 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB28P51157 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.28■□□□□ 0.84
RAB28P51157 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB28P51157 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RAB28P51157 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB28P51157 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.28■□□□□ 0.84
RAB28P51157 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB28P51157 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.28■□□□□ 0.84
RAB28P51157 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB28P51157 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB28P51157 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB28P51157 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB28P51157 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB28P51157 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.27■□□□□ 0.84
RAB28P51157 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB28P51157 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB28P51157 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.27■□□□□ 0.84
RAB28P51157 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB28P51157 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.27■□□□□ 0.83
RAB28P51157 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.27■□□□□ 0.83
RAB28P51157 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB28P51157 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB28P51157 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB28P51157 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB28P51157 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB28P51157 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB28P51157 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.26■□□□□ 0.83
RAB28P51157 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.26■□□□□ 0.83
RAB28P51157 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RAB28P51157 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RAB28P51157 AC010536.3-201ENST00000620306 533 ntBASIC20.26■□□□□ 0.83
RAB28P51157 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB28P51157 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RAB28P51157 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RAB28P51157 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB28P51157 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB28P51157 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB28P51157 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB28P51157 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.25■□□□□ 0.83
RAB28P51157 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB28P51157 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RAB28P51157 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB28P51157 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB28P51157 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB28P51157 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB28P51157 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB28P51157 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB28P51157 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
RAB28P51157 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB28P51157 AC080038.1-201ENST00000611274 1154 ntBASIC20.25■□□□□ 0.83
RAB28P51157 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms