Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CPT1AP50416 AC127496.7-201ENST00000625110 1798 ntBASIC23.37■■□□□ 1.33
CPT1AP50416 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CPT1AP50416 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
CPT1AP50416 AL355472.2-201ENST00000422958 438 ntBASIC23.36■■□□□ 1.33
CPT1AP50416 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CPT1AP50416 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.36■■□□□ 1.33
CPT1AP50416 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
CPT1AP50416 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CPT1AP50416 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CPT1AP50416 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CPT1AP50416 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.35■■□□□ 1.33
CPT1AP50416 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CPT1AP50416 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CPT1AP50416 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CPT1AP50416 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.35■■□□□ 1.33
CPT1AP50416 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.35■■□□□ 1.33
CPT1AP50416 AP003097.1-201ENST00000530657 1135 ntBASIC23.35■■□□□ 1.33
CPT1AP50416 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.35■■□□□ 1.33
CPT1AP50416 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CPT1AP50416 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CPT1AP50416 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CPT1AP50416 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CPT1AP50416 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CPT1AP50416 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CPT1AP50416 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
CPT1AP50416 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CPT1AP50416 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.34■■□□□ 1.33
CPT1AP50416 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CPT1AP50416 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CPT1AP50416 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.34■■□□□ 1.33
CPT1AP50416 C11orf96-202ENST00000528572 1834 ntBASIC23.33■■□□□ 1.33
CPT1AP50416 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.33■■□□□ 1.33
CPT1AP50416 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CPT1AP50416 AC080038.3-201ENST00000623346 1952 ntBASIC23.33■■□□□ 1.33
CPT1AP50416 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.33■■□□□ 1.33
CPT1AP50416 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CPT1AP50416 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.33■■□□□ 1.33
CPT1AP50416 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CPT1AP50416 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CPT1AP50416 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.33■■□□□ 1.33
CPT1AP50416 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.33■■□□□ 1.33
CPT1AP50416 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CPT1AP50416 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.33■■□□□ 1.33
CPT1AP50416 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CPT1AP50416 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.33■■□□□ 1.33
CPT1AP50416 AL589743.5-201ENST00000616611 1050 ntBASIC23.33■■□□□ 1.33
CPT1AP50416 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CPT1AP50416 AC026471.6-201ENST00000622954 1905 ntBASIC23.33■■□□□ 1.32
CPT1AP50416 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.33■■□□□ 1.32
CPT1AP50416 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.33■■□□□ 1.32
CPT1AP50416 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
CPT1AP50416 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CPT1AP50416 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CPT1AP50416 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CPT1AP50416 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.32■■□□□ 1.32
CPT1AP50416 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CPT1AP50416 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CPT1AP50416 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CPT1AP50416 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CPT1AP50416 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CPT1AP50416 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.32■■□□□ 1.32
CPT1AP50416 MCRIP2P1-201ENST00000394346 511 ntBASIC23.32■■□□□ 1.32
CPT1AP50416 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CPT1AP50416 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.32■■□□□ 1.32
CPT1AP50416 AL158047.1-201ENST00000445918 881 ntBASIC23.32■■□□□ 1.32
CPT1AP50416 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CPT1AP50416 AC142381.4-202ENST00000563973 229 ntBASIC23.32■■□□□ 1.32
CPT1AP50416 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.32■■□□□ 1.32
CPT1AP50416 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.32■■□□□ 1.32
CPT1AP50416 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CPT1AP50416 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.32■■□□□ 1.32
CPT1AP50416 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.32■■□□□ 1.32
CPT1AP50416 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CPT1AP50416 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.32■■□□□ 1.32
CPT1AP50416 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.31■■□□□ 1.32
CPT1AP50416 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CPT1AP50416 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CPT1AP50416 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CPT1AP50416 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CPT1AP50416 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.31■■□□□ 1.32
CPT1AP50416 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.31■■□□□ 1.32
CPT1AP50416 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.31■■□□□ 1.32
CPT1AP50416 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.31■■□□□ 1.32
CPT1AP50416 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CPT1AP50416 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.31■■□□□ 1.32
CPT1AP50416 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CPT1AP50416 AC010542.4-201ENST00000563151 1910 ntBASIC23.31■■□□□ 1.32
CPT1AP50416 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.3■■□□□ 1.32
CPT1AP50416 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.3■■□□□ 1.32
CPT1AP50416 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPT1AP50416 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.3■■□□□ 1.32
CPT1AP50416 AC060766.5-201ENST00000590539 871 ntBASIC23.3■■□□□ 1.32
CPT1AP50416 HLA-B-256ENST00000639848 1089 ntBASIC23.3■■□□□ 1.32
CPT1AP50416 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CPT1AP50416 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CPT1AP50416 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.3■■□□□ 1.32
CPT1AP50416 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.3■■□□□ 1.32
CPT1AP50416 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.29■■□□□ 1.32
CPT1AP50416 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms