Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CYP2T1P-201ENST00000432607 1285 ntBASIC19.96■□□□□ 0.79
GABRA4P48169 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.96■□□□□ 0.79
GABRA4P48169 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.96■□□□□ 0.79
GABRA4P48169 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GABRA4P48169 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.96■□□□□ 0.79
GABRA4P48169 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.96■□□□□ 0.79
GABRA4P48169 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
GABRA4P48169 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.95■□□□□ 0.79
GABRA4P48169 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
GABRA4P48169 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GABRA4P48169 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GABRA4P48169 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GABRA4P48169 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
GABRA4P48169 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.95■□□□□ 0.78
GABRA4P48169 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.95■□□□□ 0.78
GABRA4P48169 TSPY6P-201ENST00000448518 926 ntBASIC19.95■□□□□ 0.78
GABRA4P48169 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.95■□□□□ 0.78
GABRA4P48169 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GABRA4P48169 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.95■□□□□ 0.78
GABRA4P48169 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GABRA4P48169 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GABRA4P48169 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GABRA4P48169 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GABRA4P48169 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GABRA4P48169 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
GABRA4P48169 EP400NL-214ENST00000641289 2402 ntBASIC19.94■□□□□ 0.78
GABRA4P48169 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GABRA4P48169 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.94■□□□□ 0.78
GABRA4P48169 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GABRA4P48169 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.94■□□□□ 0.78
GABRA4P48169 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.94■□□□□ 0.78
GABRA4P48169 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
GABRA4P48169 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GABRA4P48169 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
GABRA4P48169 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.94■□□□□ 0.78
GABRA4P48169 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
GABRA4P48169 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GABRA4P48169 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.94■□□□□ 0.78
GABRA4P48169 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GABRA4P48169 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GABRA4P48169 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GABRA4P48169 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GABRA4P48169 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
GABRA4P48169 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
GABRA4P48169 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GABRA4P48169 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GABRA4P48169 AC091799.1-201ENST00000422823 811 ntBASIC19.93■□□□□ 0.78
GABRA4P48169 AL162412.1-201ENST00000567129 965 ntBASIC19.93■□□□□ 0.78
GABRA4P48169 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
GABRA4P48169 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GABRA4P48169 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.93■□□□□ 0.78
GABRA4P48169 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
GABRA4P48169 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
GABRA4P48169 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.93■□□□□ 0.78
GABRA4P48169 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GABRA4P48169 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GABRA4P48169 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
GABRA4P48169 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GABRA4P48169 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GABRA4P48169 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GABRA4P48169 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.92■□□□□ 0.78
GABRA4P48169 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
GABRA4P48169 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
GABRA4P48169 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GABRA4P48169 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GABRA4P48169 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.92■□□□□ 0.78
GABRA4P48169 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.92■□□□□ 0.78
GABRA4P48169 AF201337.1-201ENST00000520239 748 ntBASIC19.92■□□□□ 0.78
GABRA4P48169 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.92■□□□□ 0.78
GABRA4P48169 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GABRA4P48169 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.92■□□□□ 0.78
GABRA4P48169 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GABRA4P48169 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GABRA4P48169 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GABRA4P48169 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GABRA4P48169 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.92■□□□□ 0.78
GABRA4P48169 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
GABRA4P48169 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
GABRA4P48169 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABRA4P48169 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABRA4P48169 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABRA4P48169 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABRA4P48169 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
GABRA4P48169 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABRA4P48169 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GABRA4P48169 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GABRA4P48169 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABRA4P48169 AC142086.2-201ENST00000569753 217 ntBASIC19.91■□□□□ 0.78
GABRA4P48169 AL591742.1-201ENST00000604433 565 ntBASIC19.91■□□□□ 0.78
GABRA4P48169 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABRA4P48169 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABRA4P48169 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
GABRA4P48169 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GABRA4P48169 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABRA4P48169 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABRA4P48169 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABRA4P48169 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.9■□□□□ 0.78
GABRA4P48169 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
GABRA4P48169 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.9■□□□□ 0.78
GABRA4P48169 AC105036.2-201ENST00000569468 176 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms