Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 TSR4YOL022C 1227 nt2.96□□□□□ -1.94
SSN8P47821 ARL1YBR164C 552 nt2.96□□□□□ -1.94
SSN8P47821 SEC15YGL233W 2733 nt2.96□□□□□ -1.94
SSN8P47821 BEM4YPL161C 1902 nt2.95□□□□□ -1.94
SSN8P47821 RAV2YDR202C 1056 nt2.95□□□□□ -1.94
SSN8P47821 YER046W-AYER046W-A 330 nt2.95□□□□□ -1.94
SSN8P47821 YFH7YFR007W 1062 nt2.95□□□□□ -1.94
SSN8P47821 MND1YGL183C 660 nt2.95□□□□□ -1.94
SSN8P47821 YGL214WYGL214W 486 nt2.95□□□□□ -1.94
SSN8P47821 BCD1YHR040W 1101 nt2.95□□□□□ -1.94
SSN8P47821 DAL2YIR029W 1032 nt2.95□□□□□ -1.94
SSN8P47821 YKE2YLR200W 345 nt2.95□□□□□ -1.94
SSN8P47821 IRC21YMR073C 606 nt2.95□□□□□ -1.94
SSN8P47821 GCY1YOR120W 939 nt2.95□□□□□ -1.94
SSN8P47821 TUM1YOR251C 915 nt2.95□□□□□ -1.94
SSN8P47821 ADF1YCL058W-A 342 nt2.95□□□□□ -1.94
SSN8P47821 FLO11YIR019C 4104 nt2.95□□□□□ -1.94
SSN8P47821 NDC80YIL144W 2076 nt2.94□□□□□ -1.94
SSN8P47821 SRP1YNL189W 1629 nt2.94□□□□□ -1.94
SSN8P47821 ARF1YDL192W 546 nt2.94□□□□□ -1.94
SSN8P47821 YEL075CYEL075C 369 nt2.94□□□□□ -1.94
SSN8P47821 YGR073CYGR073C 372 nt2.94□□□□□ -1.94
SSN8P47821 YJL133C-AYJL133C-A 225 nt2.94□□□□□ -1.94
SSN8P47821 HHF2YNL030W 312 nt2.94□□□□□ -1.94
SSN8P47821 Q0017Q0017 162 nt2.94□□□□□ -1.94
SSN8P47821 BNA4YBL098W 1383 nt2.94□□□□□ -1.94
SSN8P47821 JSN1YJR091C 3276 nt2.93□□□□□ -1.94
SSN8P47821 SNQ2YDR011W 4506 nt2.93□□□□□ -1.94
SSN8P47821 RSM28YDR494W 1086 nt2.93□□□□□ -1.94
SSN8P47821 HLR1YDR528W 1272 nt2.93□□□□□ -1.94
SSN8P47821 TAD1YGL243W 1203 nt2.93□□□□□ -1.94
SSN8P47821 YHR050W-AYHR050W-A 171 nt2.93□□□□□ -1.94
SSN8P47821 DSE2YHR143W 978 nt2.93□□□□□ -1.94
SSN8P47821 CPR7YJR032W 1182 nt2.93□□□□□ -1.94
SSN8P47821 YKL070WYKL070W 510 nt2.93□□□□□ -1.94
SSN8P47821 YLL044WYLL044W 447 nt2.93□□□□□ -1.94
SSN8P47821 GRE2YOL151W 1029 nt2.93□□□□□ -1.94
SSN8P47821 YBR201C-AYBR201C-A 204 nt2.93□□□□□ -1.94
SSN8P47821 ARG5,6YER069W 2592 nt2.93□□□□□ -1.94
SSN8P47821 FKH2YNL068C 2589 nt2.93□□□□□ -1.94
SSN8P47821 STU2YLR045C 2667 nt2.92□□□□□ -1.94
SSN8P47821 REG1YDR028C 3045 nt2.92□□□□□ -1.94
SSN8P47821 YDL163WYDL163W 303 nt2.92□□□□□ -1.94
SSN8P47821 YFL012W-AYFL012W-A 375 nt2.92□□□□□ -1.94
SSN8P47821 YGR039WYGR039W 312 nt2.92□□□□□ -1.94
SSN8P47821 YIP1YGR172C 747 nt2.92□□□□□ -1.94
SSN8P47821 YHR086W-AYHR086W-A 162 nt2.92□□□□□ -1.94
SSN8P47821 SDP1YIL113W 630 nt2.92□□□□□ -1.94
SSN8P47821 SDS22YKL193C 1017 nt2.92□□□□□ -1.94
SSN8P47821 GTT2YLL060C 702 nt2.92□□□□□ -1.94
SSN8P47821 VMA6YLR447C 1038 nt2.92□□□□□ -1.94
SSN8P47821 YNL184CYNL184C 327 nt2.92□□□□□ -1.94
SSN8P47821 CMD1YBR109C 444 nt2.92□□□□□ -1.94
SSN8P47821 SHG1YBR258C 429 nt2.92□□□□□ -1.94
SSN8P47821 YNL011CYNL011C 1335 nt2.92□□□□□ -1.94
SSN8P47821 KIN82YCR091W 2163 nt2.91□□□□□ -1.94
SSN8P47821 NUP60YAR002W 1620 nt2.91□□□□□ -1.94
SSN8P47821 TPO5YKL174C 1857 nt2.91□□□□□ -1.94
SSN8P47821 YDR320W-BYDR320W-B 138 nt2.91□□□□□ -1.94
SSN8P47821 YGL039WYGL039W 1047 nt2.91□□□□□ -1.94
SSN8P47821 PRP38YGR075C 729 nt2.91□□□□□ -1.94
SSN8P47821 COG2YGR120C 789 nt2.91□□□□□ -1.94
SSN8P47821 INO4YOL108C 456 nt2.91□□□□□ -1.94
SSN8P47821 YOR277CYOR277C 309 nt2.91□□□□□ -1.94
SSN8P47821 LTP1YPR073C 486 nt2.91□□□□□ -1.94
SSN8P47821 RPC40YPR110C 1008 nt2.91□□□□□ -1.94
SSN8P47821 YPR203WYPR203W 309 nt2.91□□□□□ -1.94
SSN8P47821 INP52YNL106C 3552 nt2.91□□□□□ -1.94
SSN8P47821 IRC3YDR332W 2070 nt2.91□□□□□ -1.94
SSN8P47821 SLF1YDR515W 1344 nt2.91□□□□□ -1.94
SSN8P47821 PEX6YNL329C 3093 nt2.9□□□□□ -1.94
SSN8P47821 YCR085WYCR085W 354 nt2.9□□□□□ -1.95
SSN8P47821 SLU7YDR088C 1149 nt2.9□□□□□ -1.95
SSN8P47821 MTC3YGL226W 372 nt2.9□□□□□ -1.95
SSN8P47821 YGR160WYGR160W 612 nt2.9□□□□□ -1.95
SSN8P47821 BUD19YJL188C 309 nt2.9□□□□□ -1.95
SSN8P47821 AIM25YJR100C 984 nt2.9□□□□□ -1.95
SSN8P47821 PIR1YKL164C 1026 nt2.9□□□□□ -1.95
SSN8P47821 ECM9YKR004C 1134 nt2.9□□□□□ -1.95
SSN8P47821 YKR011CYKR011C 1062 nt2.9□□□□□ -1.95
SSN8P47821 RSM19YNR037C 276 nt2.9□□□□□ -1.95
SSN8P47821 LOA1YPR139C 903 nt2.9□□□□□ -1.95
SSN8P47821 CUR1YPR158W 759 nt2.9□□□□□ -1.95
SSN8P47821 YDL176WYDL176W 2127 nt2.9□□□□□ -1.95
SSN8P47821 YPS6YIR039C 1614 nt2.9□□□□□ -1.95
SSN8P47821 CDC40YDR364C 1368 nt2.89□□□□□ -1.95
SSN8P47821 NOP12YOL041C 1380 nt2.89□□□□□ -1.95
SSN8P47821 PUF6YDR496C 1971 nt2.89□□□□□ -1.95
SSN8P47821 YDL050CYDL050C 372 nt2.89□□□□□ -1.95
SSN8P47821 SLD5YDR489W 885 nt2.89□□□□□ -1.95
SSN8P47821 VMA10YHR039C-A 345 nt2.89□□□□□ -1.95
SSN8P47821 PRP21YJL203W 843 nt2.89□□□□□ -1.95
SSN8P47821 RPA12YJR063W 378 nt2.89□□□□□ -1.95
SSN8P47821 YET1YKL065C 621 nt2.89□□□□□ -1.95
SSN8P47821 ECM4YKR076W 1113 nt2.89□□□□□ -1.95
SSN8P47821 SEC14YMR079W 915 nt2.89□□□□□ -1.95
SSN8P47821 YNL235CYNL235C 432 nt2.89□□□□□ -1.95
SSN8P47821 RFC3YNL290W 1023 nt2.89□□□□□ -1.95
SSN8P47821 YAP7YOL028C 738 nt2.89□□□□□ -1.95
SSN8P47821 SGT1YOR057W 1188 nt2.89□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 29.8 ms