Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YBP2YGL060W 1926 nt2.55□□□□□ -2
CDC40P40968 VEL1YGL258W 621 nt2.55□□□□□ -2
CDC40P40968 CBP2YHL038C 1893 nt2.55□□□□□ -2
CDC40P40968 VHR1YIL056W 1923 nt2.55□□□□□ -2
CDC40P40968 GPI13YLL031C 3054 nt2.55□□□□□ -2
CDC40P40968 SDO1YLR022C 753 nt2.55□□□□□ -2
CDC40P40968 LIP2YLR239C 987 nt2.55□□□□□ -2
CDC40P40968 YMR181CYMR181C 465 nt2.55□□□□□ -2
CDC40P40968 YNL089CYNL089C 477 nt2.55□□□□□ -2
CDC40P40968 MRPL40YPL173W 894 nt2.55□□□□□ -2
CDC40P40968 YHR080CYHR080C 4038 nt2.55□□□□□ -2
CDC40P40968 YOL057WYOL057W 2136 nt2.54□□□□□ -2
CDC40P40968 BNR1YIL159W 4128 nt2.54□□□□□ -2
CDC40P40968 MOT1YPL082C 5604 nt2.54□□□□□ -2
CDC40P40968 BNA4YBL098W 1383 nt2.54□□□□□ -2
CDC40P40968 TVP15YDR100W 432 nt2.54□□□□□ -2
CDC40P40968 YHL044WYHL044W 708 nt2.54□□□□□ -2
CDC40P40968 YJL032WYJL032W 315 nt2.54□□□□□ -2
CDC40P40968 FAR3YMR052W 615 nt2.54□□□□□ -2
CDC40P40968 ATG19YOL082W 1248 nt2.54□□□□□ -2
CDC40P40968 RIB4YOL143C 510 nt2.54□□□□□ -2
CDC40P40968 YOR277CYOR277C 309 nt2.54□□□□□ -2
CDC40P40968 TOM1YDR457W 9807 nt2.54□□□□□ -2
CDC40P40968 INP52YNL106C 3552 nt2.54□□□□□ -2
CDC40P40968 YLR278CYLR278C 4026 nt2.53□□□□□ -2
CDC40P40968 BUD4YJR092W 4344 nt2.53□□□□□ -2
CDC40P40968 GCD6YDR211W 2139 nt2.53□□□□□ -2
CDC40P40968 NOP12YOL041C 1380 nt2.53□□□□□ -2
CDC40P40968 ESL1YIL151C 3357 nt2.53□□□□□ -2
CDC40P40968 ECM21YBL101C 3354 nt2.53□□□□□ -2
CDC40P40968 REC8YPR007C 2043 nt2.53□□□□□ -2
CDC40P40968 YFL015CYFL015C 495 nt2.53□□□□□ -2
CDC40P40968 YGL117WYGL117W 798 nt2.53□□□□□ -2
CDC40P40968 YIR018C-AYIR018C-A 138 nt2.53□□□□□ -2
CDC40P40968 MTG1YMR097C 1104 nt2.53□□□□□ -2
CDC40P40968 GOT1YMR292W 417 nt2.53□□□□□ -2
CDC40P40968 YPR203WYPR203W 309 nt2.53□□□□□ -2
CDC40P40968 YBR090CYBR090C 369 nt2.53□□□□□ -2
CDC40P40968 JJJ1YNL227C 1773 nt2.53□□□□□ -2
CDC40P40968 TFC4YGR047C 3078 nt2.53□□□□□ -2.01
CDC40P40968 CAF120YNL278W 3183 nt2.52□□□□□ -2.01
CDC40P40968 TIM11YDR322C-A 291 nt2.52□□□□□ -2.01
CDC40P40968 YGR111WYGR111W 1203 nt2.52□□□□□ -2.01
CDC40P40968 SFH1YLR321C 1281 nt2.52□□□□□ -2.01
CDC40P40968 MRPL33YMR286W 261 nt2.52□□□□□ -2.01
CDC40P40968 DIA1YMR316W 1011 nt2.52□□□□□ -2.01
CDC40P40968 RPL23AYBL087C 414 nt2.52□□□□□ -2.01
CDC40P40968 NGL1YOL042W 1092 nt2.52□□□□□ -2.01
CDC40P40968 YOL134CYOL134C 390 nt2.52□□□□□ -2.01
CDC40P40968 RAD2YGR258C 3096 nt2.52□□□□□ -2.01
CDC40P40968 SEN54YPL083C 1404 nt2.51□□□□□ -2.01
CDC40P40968 GCV2YMR189W 3105 nt2.51□□□□□ -2.01
CDC40P40968 SRB4YER022W 2064 nt2.51□□□□□ -2.01
CDC40P40968 FUN30YAL019W 3396 nt2.51□□□□□ -2.01
CDC40P40968 FKH2YNL068C 2589 nt2.51□□□□□ -2.01
CDC40P40968 TRM2YKR056W 1920 nt2.51□□□□□ -2.01
CDC40P40968 GIC2YDR309C 1152 nt2.51□□□□□ -2.01
CDC40P40968 YFR054CYFR054C 579 nt2.51□□□□□ -2.01
CDC40P40968 MVB12YGR206W 306 nt2.51□□□□□ -2.01
CDC40P40968 GOS1YHL031C 672 nt2.51□□□□□ -2.01
CDC40P40968 YHR213WYHR213W 597 nt2.51□□□□□ -2.01
CDC40P40968 YAR062WYAR062W 597 nt2.51□□□□□ -2.01
CDC40P40968 DIM1YPL266W 957 nt2.51□□□□□ -2.01
CDC40P40968 CDC55YGL190C 1581 nt2.51□□□□□ -2.01
CDC40P40968 ART10YLR392C 1557 nt2.51□□□□□ -2.01
CDC40P40968 VPS53YJL029C 2469 nt2.51□□□□□ -2.01
CDC40P40968 UTP14YML093W 2700 nt2.51□□□□□ -2.01
CDC40P40968 FIR1YER032W 2631 nt2.51□□□□□ -2.01
CDC40P40968 MRH4YGL064C 1686 nt2.5□□□□□ -2.01
CDC40P40968 RIM13YMR154C 2184 nt2.5□□□□□ -2.01
CDC40P40968 ERG11YHR007C 1593 nt2.5□□□□□ -2.01
CDC40P40968 PMR1YGL167C 2853 nt2.5□□□□□ -2.01
CDC40P40968 FLO11YIR019C 4104 nt2.5□□□□□ -2.01
CDC40P40968 APC11YDL008W 498 nt2.5□□□□□ -2.01
CDC40P40968 YGL039WYGL039W 1047 nt2.5□□□□□ -2.01
CDC40P40968 YHR022CYHR022C 771 nt2.5□□□□□ -2.01
CDC40P40968 HSP10YOR020C 321 nt2.5□□□□□ -2.01
CDC40P40968 RPL22BYFL034C-A 369 nt2.49□□□□□ -2.01
CDC40P40968 SUP56tL(CAA)A 82 nt2.49□□□□□ -2.01
CDC40P40968 SUP53tL(CAA)C 82 nt2.49□□□□□ -2.01
CDC40P40968 tL(CAA)DtL(CAA)D 82 nt2.49□□□□□ -2.01
CDC40P40968 tL(CAA)G1tL(CAA)G1 82 nt2.49□□□□□ -2.01
CDC40P40968 SUP54tL(CAA)G2 82 nt2.49□□□□□ -2.01
CDC40P40968 tL(CAA)G3tL(CAA)G3 82 nt2.49□□□□□ -2.01
CDC40P40968 tL(CAA)KtL(CAA)K 82 nt2.49□□□□□ -2.01
CDC40P40968 CDC26YFR036W 375 nt2.49□□□□□ -2.01
CDC40P40968 tL(CAA)LtL(CAA)L 82 nt2.49□□□□□ -2.01
CDC40P40968 tL(CAA)MtL(CAA)M 82 nt2.49□□□□□ -2.01
CDC40P40968 tL(CAA)NtL(CAA)N 82 nt2.49□□□□□ -2.01
CDC40P40968 PNC1YGL037C 651 nt2.49□□□□□ -2.01
CDC40P40968 YGL063C-AYGL063C-A 150 nt2.49□□□□□ -2.01
CDC40P40968 GTR2YGR163W 1026 nt2.49□□□□□ -2.01
CDC40P40968 RPL17BYJL177W 555 nt2.49□□□□□ -2.01
CDC40P40968 YKL069WYKL069W 543 nt2.49□□□□□ -2.01
CDC40P40968 RPS1AYLR441C 768 nt2.49□□□□□ -2.01
CDC40P40968 YMR158C-AYMR158C-A 138 nt2.49□□□□□ -2.01
CDC40P40968 MRPS8YMR158W 468 nt2.49□□□□□ -2.01
CDC40P40968 YIP3YNL044W 531 nt2.49□□□□□ -2.01
CDC40P40968 YSF3YNL138W-A 258 nt2.49□□□□□ -2.01
CDC40P40968 BTS1YPL069C 1008 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms