Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 COX4YGL187C 468 nt4.75□□□□□ -1.65
MSH4P40965 FYV4YHR059W 393 nt4.75□□□□□ -1.65
MSH4P40965 YIL014C-AYIL014C-A 315 nt4.75□□□□□ -1.65
MSH4P40965 HIT1YJR055W 495 nt4.75□□□□□ -1.65
MSH4P40965 ENT3YJR125C 1227 nt4.75□□□□□ -1.65
MSH4P40965 MCR1YKL150W 909 nt4.75□□□□□ -1.65
MSH4P40965 MSS18YPR134W 807 nt4.75□□□□□ -1.65
MSH4P40965 MTL1YGR023W 1656 nt4.75□□□□□ -1.65
MSH4P40965 BUD5YCR038C 1929 nt4.75□□□□□ -1.65
MSH4P40965 NHX1YDR456W 1902 nt4.75□□□□□ -1.65
MSH4P40965 MON1YGL124C 1935 nt4.75□□□□□ -1.65
MSH4P40965 TCO89YPL180W 2400 nt4.75□□□□□ -1.65
MSH4P40965 GDI1YER136W 1356 nt4.75□□□□□ -1.65
MSH4P40965 LOS1YKL205W 3303 nt4.75□□□□□ -1.65
MSH4P40965 AIP1YMR092C 1848 nt4.74□□□□□ -1.65
MSH4P40965 PDR12YPL058C 4536 nt4.74□□□□□ -1.65
MSH4P40965 CHZ1YER030W 462 nt4.74□□□□□ -1.65
MSH4P40965 TIF11YMR260C 462 nt4.74□□□□□ -1.65
MSH4P40965 ASI2YNL159C 870 nt4.74□□□□□ -1.65
MSH4P40965 SUS1YBR111W-A 291 nt4.74□□□□□ -1.65
MSH4P40965 GRS2YPR081C 1857 nt4.74□□□□□ -1.65
MSH4P40965 MUD2YKL074C 1584 nt4.74□□□□□ -1.65
MSH4P40965 PPN1YDR452W 2025 nt4.73□□□□□ -1.65
MSH4P40965 YKR078WYKR078W 1758 nt4.73□□□□□ -1.65
MSH4P40965 GCD10YNL062C 1437 nt4.73□□□□□ -1.65
MSH4P40965 GAL11YOL051W 3246 nt4.73□□□□□ -1.65
MSH4P40965 YER135CYER135C 393 nt4.73□□□□□ -1.65
MSH4P40965 FAR7YFR008W 666 nt4.73□□□□□ -1.65
MSH4P40965 MPC3YGR243W 441 nt4.73□□□□□ -1.65
MSH4P40965 YJL127C-BYJL127C-B 159 nt4.73□□□□□ -1.65
MSH4P40965 YPL025CYPL025C 558 nt4.73□□□□□ -1.65
MSH4P40965 YPR050CYPR050C 414 nt4.73□□□□□ -1.65
MSH4P40965 SPT23YKL020C 3249 nt4.72□□□□□ -1.65
MSH4P40965 TRK1YJL129C 3708 nt4.72□□□□□ -1.65
MSH4P40965 YPD1YDL235C 504 nt4.72□□□□□ -1.65
MSH4P40965 HOP2YGL033W 657 nt4.72□□□□□ -1.65
MSH4P40965 LSB1YGR136W 726 nt4.72□□□□□ -1.65
MSH4P40965 PAM18YLR008C 507 nt4.72□□□□□ -1.65
MSH4P40965 TPK2YPL203W 1143 nt4.72□□□□□ -1.65
MSH4P40965 VPS33YLR396C 2076 nt4.72□□□□□ -1.65
MSH4P40965 AIM21YIR003W 2040 nt4.72□□□□□ -1.65
MSH4P40965 OST1YJL002C 1431 nt4.72□□□□□ -1.65
MSH4P40965 SSL1YLR005W 1386 nt4.71□□□□□ -1.66
MSH4P40965 FAD1YDL045C 921 nt4.71□□□□□ -1.66
MSH4P40965 THI13YDL244W 1023 nt4.71□□□□□ -1.66
MSH4P40965 MRM2YGL136C 963 nt4.71□□□□□ -1.66
MSH4P40965 YHL048C-AYHL048C-A 135 nt4.71□□□□□ -1.66
MSH4P40965 MCM22YJR135C 720 nt4.71□□□□□ -1.66
MSH4P40965 CTK3YML112W 891 nt4.71□□□□□ -1.66
MSH4P40965 YNL089CYNL089C 477 nt4.71□□□□□ -1.66
MSH4P40965 SUI1YNL244C 327 nt4.71□□□□□ -1.66
MSH4P40965 YOR282WYOR282W 321 nt4.71□□□□□ -1.66
MSH4P40965 YCF1YDR135C 4548 nt4.71□□□□□ -1.66
MSH4P40965 VPS45YGL095C 1734 nt4.71□□□□□ -1.66
MSH4P40965 MSM1YGR171C 1728 nt4.71□□□□□ -1.66
MSH4P40965 BCK2YER167W 2556 nt4.7□□□□□ -1.66
MSH4P40965 SKO1YNL167C 1944 nt4.7□□□□□ -1.66
MSH4P40965 KIN4YOR233W 2403 nt4.7□□□□□ -1.66
MSH4P40965 SOL4YGR248W 768 nt4.7□□□□□ -1.66
MSH4P40965 CFD1YIL003W 882 nt4.7□□□□□ -1.66
MSH4P40965 AIM29YKR074W 468 nt4.7□□□□□ -1.66
MSH4P40965 RDN58-1RDN58-1 158 nt4.7□□□□□ -1.66
MSH4P40965 RDN58-2RDN58-2 158 nt4.7□□□□□ -1.66
MSH4P40965 SIW14YNL032W 846 nt4.7□□□□□ -1.66
MSH4P40965 YPT53YNL093W 663 nt4.7□□□□□ -1.66
MSH4P40965 YAF9YNL107W 681 nt4.7□□□□□ -1.66
MSH4P40965 YOR392WYOR392W 444 nt4.7□□□□□ -1.66
MSH4P40965 YPL197CYPL197C 414 nt4.7□□□□□ -1.66
MSH4P40965 snR54snR54 86 nt4.7□□□□□ -1.66
MSH4P40965 ISW2YOR304W 3363 nt4.7□□□□□ -1.66
MSH4P40965 ARP5YNL059C 2268 nt4.7□□□□□ -1.66
MSH4P40965 NUP133YKR082W 3474 nt4.7□□□□□ -1.66
MSH4P40965 ANR2YKL047W 1551 nt4.7□□□□□ -1.66
MSH4P40965 VMA1YDL185W 3216 nt4.69□□□□□ -1.66
MSH4P40965 GYP6YJL044C 1377 nt4.69□□□□□ -1.66
MSH4P40965 YAP3YHL009C 993 nt4.69□□□□□ -1.66
MSH4P40965 YNL043CYNL043C 321 nt4.69□□□□□ -1.66
MSH4P40965 RPL18BYNL301C 561 nt4.69□□□□□ -1.66
MSH4P40965 YOR082CYOR082C 342 nt4.69□□□□□ -1.66
MSH4P40965 VPS73YGL104C 1461 nt4.69□□□□□ -1.66
MSH4P40965 ATG2YNL242W 4779 nt4.68□□□□□ -1.66
MSH4P40965 TFB2YPL122C 1542 nt4.68□□□□□ -1.66
MSH4P40965 MIS1YBR084W 2928 nt4.68□□□□□ -1.66
MSH4P40965 RPS13YDR064W 456 nt4.68□□□□□ -1.66
MSH4P40965 YGL015CYGL015C 393 nt4.68□□□□□ -1.66
MSH4P40965 YHR032C-AYHR032C-A 120 nt4.68□□□□□ -1.66
MSH4P40965 IRC18YJL037W 675 nt4.68□□□□□ -1.66
MSH4P40965 RPL17BYJL177W 555 nt4.68□□□□□ -1.66
MSH4P40965 YKL065W-AYKL065W-A 222 nt4.68□□□□□ -1.66
MSH4P40965 YPL225WYPL225W 441 nt4.68□□□□□ -1.66
MSH4P40965 YGR117CYGR117C 1431 nt4.68□□□□□ -1.66
MSH4P40965 HFD1YMR110C 1599 nt4.68□□□□□ -1.66
MSH4P40965 VHR1YIL056W 1923 nt4.68□□□□□ -1.66
MSH4P40965 SLY41YOR307C 1362 nt4.67□□□□□ -1.66
MSH4P40965 DAP2YHR028C 2457 nt4.67□□□□□ -1.66
MSH4P40965 ASI3YNL008C 2031 nt4.67□□□□□ -1.66
MSH4P40965 FAR8YMR029C 1572 nt4.67□□□□□ -1.66
MSH4P40965 SAE2YGL175C 1038 nt4.67□□□□□ -1.66
MSH4P40965 RTS3YGR161C 792 nt4.67□□□□□ -1.66
MSH4P40965 YKL070WYKL070W 510 nt4.67□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 43.2 ms