Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.21■■□□□ 1.31
RFC5P40937 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RFC5P40937 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.21■■□□□ 1.31
RFC5P40937 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RFC5P40937 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFC5P40937 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFC5P40937 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RFC5P40937 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.2■■□□□ 1.3
RFC5P40937 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFC5P40937 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFC5P40937 AC245052.3-201ENST00000450182 901 ntBASIC23.2■■□□□ 1.3
RFC5P40937 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
RFC5P40937 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFC5P40937 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFC5P40937 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFC5P40937 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RFC5P40937 AC068338.2-201ENST00000563278 1430 ntBASIC23.19■■□□□ 1.3
RFC5P40937 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFC5P40937 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.19■■□□□ 1.3
RFC5P40937 HLA-L-209ENST00000420110 1011 ntBASIC23.19■■□□□ 1.3
RFC5P40937 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.19■■□□□ 1.3
RFC5P40937 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.19■■□□□ 1.3
RFC5P40937 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.19■■□□□ 1.3
RFC5P40937 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
RFC5P40937 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RFC5P40937 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RFC5P40937 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
RFC5P40937 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RFC5P40937 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFC5P40937 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFC5P40937 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFC5P40937 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RFC5P40937 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.17■■□□□ 1.3
RFC5P40937 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFC5P40937 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFC5P40937 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFC5P40937 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFC5P40937 GPX1P1-201ENST00000388829 606 ntBASIC23.17■■□□□ 1.3
RFC5P40937 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.17■■□□□ 1.3
RFC5P40937 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
RFC5P40937 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.17■■□□□ 1.3
RFC5P40937 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RFC5P40937 AL162412.1-201ENST00000567129 965 ntBASIC23.17■■□□□ 1.3
RFC5P40937 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.17■■□□□ 1.3
RFC5P40937 AL121832.2-201ENST00000610979 668 ntBASIC23.17■■□□□ 1.3
RFC5P40937 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.17■■□□□ 1.3
RFC5P40937 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFC5P40937 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RFC5P40937 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFC5P40937 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFC5P40937 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFC5P40937 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
RFC5P40937 EP400NL-214ENST00000641289 2402 ntBASIC23.16■■□□□ 1.3
RFC5P40937 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RFC5P40937 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.16■■□□□ 1.3
RFC5P40937 AC133552.2-202ENST00000575694 574 ntBASIC23.16■■□□□ 1.3
RFC5P40937 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.16■■□□□ 1.3
RFC5P40937 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.16■■□□□ 1.3
RFC5P40937 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RFC5P40937 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
RFC5P40937 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
RFC5P40937 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFC5P40937 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
RFC5P40937 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.15■■□□□ 1.3
RFC5P40937 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFC5P40937 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
RFC5P40937 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFC5P40937 CYP2T1P-201ENST00000432607 1285 ntBASIC23.15■■□□□ 1.3
RFC5P40937 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.15■■□□□ 1.3
RFC5P40937 AC104771.1-201ENST00000603335 964 ntBASIC23.15■■□□□ 1.3
RFC5P40937 AL591742.1-201ENST00000604433 565 ntBASIC23.15■■□□□ 1.3
RFC5P40937 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.15■■□□□ 1.3
RFC5P40937 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RFC5P40937 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFC5P40937 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.14■■□□□ 1.3
RFC5P40937 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFC5P40937 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.14■■□□□ 1.3
RFC5P40937 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFC5P40937 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFC5P40937 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFC5P40937 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFC5P40937 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFC5P40937 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFC5P40937 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFC5P40937 AC083906.2-201ENST00000511578 360 ntBASIC23.14■■□□□ 1.29
RFC5P40937 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.14■■□□□ 1.29
RFC5P40937 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFC5P40937 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFC5P40937 AL109923.1-201ENST00000618799 583 ntBASIC23.14■■□□□ 1.29
RFC5P40937 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms