Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 PCDHAC2-203ENST00000615316 3011 ntBASIC18.19■□□□□ 0.5
GDNFP39905 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.19■□□□□ 0.5
GDNFP39905 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.19■□□□□ 0.5
GDNFP39905 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.19■□□□□ 0.5
GDNFP39905 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 AC241377.3-202ENST00000626088 1088 ntBASIC18.19■□□□□ 0.5
GDNFP39905 AC241585.3-202ENST00000628937 1088 ntBASIC18.19■□□□□ 0.5
GDNFP39905 AC245100.8-202ENST00000629247 1058 ntBASIC18.19■□□□□ 0.5
GDNFP39905 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.19■□□□□ 0.5
GDNFP39905 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.19■□□□□ 0.5
GDNFP39905 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDNFP39905 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDNFP39905 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GDNFP39905 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GDNFP39905 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDNFP39905 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDNFP39905 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GDNFP39905 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.18■□□□□ 0.5
GDNFP39905 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDNFP39905 pRNA.6-201ENST00000610482 90 ntBASIC18.18■□□□□ 0.5
GDNFP39905 pRNA.5-201ENST00000612139 90 ntBASIC18.18■□□□□ 0.5
GDNFP39905 pRNA.11-201ENST00000618423 90 ntBASIC18.18■□□□□ 0.5
GDNFP39905 pRNA.13-201ENST00000619112 90 ntBASIC18.18■□□□□ 0.5
GDNFP39905 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.18■□□□□ 0.5
GDNFP39905 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDNFP39905 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.18■□□□□ 0.5
GDNFP39905 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GDNFP39905 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDNFP39905 AC073314.1-201ENST00000568729 2216 ntBASIC18.18■□□□□ 0.5
GDNFP39905 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDNFP39905 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GDNFP39905 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
GDNFP39905 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.17■□□□□ 0.5
GDNFP39905 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.17■□□□□ 0.5
GDNFP39905 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
GDNFP39905 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GDNFP39905 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GDNFP39905 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.17■□□□□ 0.5
GDNFP39905 AL499627.2-201ENST00000606283 725 ntBASIC18.17■□□□□ 0.5
GDNFP39905 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GDNFP39905 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GDNFP39905 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.17■□□□□ 0.5
GDNFP39905 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
GDNFP39905 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
GDNFP39905 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GDNFP39905 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDNFP39905 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDNFP39905 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDNFP39905 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.16■□□□□ 0.5
GDNFP39905 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDNFP39905 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.16■□□□□ 0.5
GDNFP39905 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDNFP39905 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDNFP39905 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.16■□□□□ 0.5
GDNFP39905 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GDNFP39905 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.16■□□□□ 0.5
GDNFP39905 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GDNFP39905 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GDNFP39905 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.15■□□□□ 0.5
GDNFP39905 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.15■□□□□ 0.5
GDNFP39905 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDNFP39905 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDNFP39905 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDNFP39905 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.15■□□□□ 0.5
GDNFP39905 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.15■□□□□ 0.5
GDNFP39905 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDNFP39905 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.15■□□□□ 0.5
GDNFP39905 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
GDNFP39905 AL136116.3-201ENST00000402907 1138 ntBASIC18.15■□□□□ 0.5
GDNFP39905 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GDNFP39905 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.15■□□□□ 0.5
GDNFP39905 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
GDNFP39905 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.15■□□□□ 0.5
GDNFP39905 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDNFP39905 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDNFP39905 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDNFP39905 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDNFP39905 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
GDNFP39905 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.15■□□□□ 0.5
GDNFP39905 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GDNFP39905 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.15■□□□□ 0.5
GDNFP39905 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.14■□□□□ 0.5
GDNFP39905 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GDNFP39905 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GDNFP39905 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
GDNFP39905 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GDNFP39905 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.14■□□□□ 0.49
GDNFP39905 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms