Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
KRT20P35900 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT20P35900 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT20P35900 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT20P35900 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT20P35900 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT20P35900 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT20P35900 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
KRT20P35900 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.83■□□□□ 0.77
KRT20P35900 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
KRT20P35900 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT20P35900 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT20P35900 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.83■□□□□ 0.77
KRT20P35900 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT20P35900 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.83■□□□□ 0.77
KRT20P35900 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
KRT20P35900 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
KRT20P35900 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT20P35900 AC009237.3-201ENST00000393279 1427 ntBASIC19.83■□□□□ 0.76
KRT20P35900 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KRT20P35900 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.83■□□□□ 0.76
KRT20P35900 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.82■□□□□ 0.76
KRT20P35900 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
KRT20P35900 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.82■□□□□ 0.76
KRT20P35900 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
KRT20P35900 MIR6084-201ENST00000622012 110 ntBASIC19.82■□□□□ 0.76
KRT20P35900 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
KRT20P35900 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
KRT20P35900 AC092667.1-201ENST00000434301 2586 ntBASIC19.82■□□□□ 0.76
KRT20P35900 AF106564.1-201ENST00000607058 2553 ntBASIC19.82■□□□□ 0.76
KRT20P35900 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT20P35900 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT20P35900 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT20P35900 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.81■□□□□ 0.76
KRT20P35900 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT20P35900 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT20P35900 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT20P35900 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT20P35900 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT20P35900 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT20P35900 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT20P35900 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
KRT20P35900 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT20P35900 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT20P35900 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.81■□□□□ 0.76
KRT20P35900 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT20P35900 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT20P35900 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KRT20P35900 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KRT20P35900 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT20P35900 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT20P35900 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.8■□□□□ 0.76
KRT20P35900 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT20P35900 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT20P35900 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT20P35900 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
KRT20P35900 Z98882.1-201ENST00000622160 2253 ntBASIC19.8■□□□□ 0.76
KRT20P35900 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT20P35900 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT20P35900 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT20P35900 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT20P35900 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT20P35900 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT20P35900 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT20P35900 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT20P35900 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT20P35900 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KRT20P35900 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.79■□□□□ 0.76
KRT20P35900 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
KRT20P35900 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT20P35900 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT20P35900 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT20P35900 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms