Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 DTD1YDL219W 453 nt3.63□□□□□ -1.83
MSH1P25846 YER046W-AYER046W-A 330 nt3.63□□□□□ -1.83
MSH1P25846 AGE2YIL044C 897 nt3.63□□□□□ -1.83
MSH1P25846 YIL141WYIL141W 390 nt3.63□□□□□ -1.83
MSH1P25846 SFT1YKL006C-A 294 nt3.63□□□□□ -1.83
MSH1P25846 YKR011CYKR011C 1062 nt3.63□□□□□ -1.83
MSH1P25846 YOL029CYOL029C 606 nt3.63□□□□□ -1.83
MSH1P25846 RPC40YPR110C 1008 nt3.63□□□□□ -1.83
MSH1P25846 VAC14YLR386W 2643 nt3.63□□□□□ -1.83
MSH1P25846 FAS1YKL182W 6156 nt3.63□□□□□ -1.83
MSH1P25846 FMN1YDR236C 657 nt3.62□□□□□ -1.83
MSH1P25846 MIG3YER028C 1185 nt3.62□□□□□ -1.83
MSH1P25846 COG2YGR120C 789 nt3.62□□□□□ -1.83
MSH1P25846 YIP1YGR172C 747 nt3.62□□□□□ -1.83
MSH1P25846 RPL27AYHR010W 411 nt3.62□□□□□ -1.83
MSH1P25846 YHR050W-AYHR050W-A 171 nt3.62□□□□□ -1.83
MSH1P25846 YKE2YLR200W 345 nt3.62□□□□□ -1.83
MSH1P25846 ECI1YLR284C 843 nt3.62□□□□□ -1.83
MSH1P25846 MPD2YOL088C 834 nt3.62□□□□□ -1.83
MSH1P25846 TIR2YOR010C 756 nt3.62□□□□□ -1.83
MSH1P25846 SUS1YBR111W-A 291 nt3.62□□□□□ -1.83
MSH1P25846 AVT5YBL089W 1380 nt3.62□□□□□ -1.83
MSH1P25846 KAP95YLR347C 2586 nt3.61□□□□□ -1.83
MSH1P25846 PEX5YDR244W 1839 nt3.61□□□□□ -1.83
MSH1P25846 BSC1YDL037C 987 nt3.61□□□□□ -1.83
MSH1P25846 OCA6YDR067C 675 nt3.61□□□□□ -1.83
MSH1P25846 VFA1YER128W 612 nt3.61□□□□□ -1.83
MSH1P25846 THG1YGR024C 714 nt3.61□□□□□ -1.83
MSH1P25846 DSE2YHR143W 978 nt3.61□□□□□ -1.83
MSH1P25846 CKA1YIL035C 1119 nt3.61□□□□□ -1.83
MSH1P25846 MRPL16YBL038W 699 nt3.61□□□□□ -1.83
MSH1P25846 PDR17YNL264C 1053 nt3.61□□□□□ -1.83
MSH1P25846 RSM19YNR037C 276 nt3.61□□□□□ -1.83
MSH1P25846 GRE2YOL151W 1029 nt3.61□□□□□ -1.83
MSH1P25846 RPS7AYOR096W 573 nt3.61□□□□□ -1.83
MSH1P25846 NUP60YAR002W 1620 nt3.61□□□□□ -1.83
MSH1P25846 RPN2YIL075C 2838 nt3.61□□□□□ -1.83
MSH1P25846 PDS5YMR076C 3834 nt3.6□□□□□ -1.83
MSH1P25846 HBT1YDL223C 3141 nt3.6□□□□□ -1.83
MSH1P25846 HFM1YGL251C 3564 nt3.6□□□□□ -1.83
MSH1P25846 SLK19YOR195W 2466 nt3.6□□□□□ -1.83
MSH1P25846 YDL176WYDL176W 2127 nt3.6□□□□□ -1.83
MSH1P25846 MGT1YDL200C 567 nt3.6□□□□□ -1.83
MSH1P25846 SLD5YDR489W 885 nt3.6□□□□□ -1.83
MSH1P25846 HLR1YDR528W 1272 nt3.6□□□□□ -1.83
MSH1P25846 TMA20YER007C-A 546 nt3.6□□□□□ -1.83
MSH1P25846 YET1YKL065C 621 nt3.6□□□□□ -1.83
MSH1P25846 YKL070WYKL070W 510 nt3.6□□□□□ -1.83
MSH1P25846 RPN13YLR421C 471 nt3.6□□□□□ -1.83
MSH1P25846 HHF2YNL030W 312 nt3.6□□□□□ -1.83
MSH1P25846 YRO2YBR054W 1035 nt3.6□□□□□ -1.83
MSH1P25846 YPR077CYPR077C 372 nt3.6□□□□□ -1.83
MSH1P25846 MUB1YMR100W 1863 nt3.6□□□□□ -1.83
MSH1P25846 LST4YKL176C 2487 nt3.6□□□□□ -1.83
MSH1P25846 BRE5YNR051C 1548 nt3.6□□□□□ -1.83
MSH1P25846 YCT1YLL055W 1596 nt3.59□□□□□ -1.83
MSH1P25846 SKN7YHR206W 1869 nt3.59□□□□□ -1.83
MSH1P25846 YCR045W-AYCR045W-A 351 nt3.59□□□□□ -1.83
MSH1P25846 CPR5YDR304C 678 nt3.59□□□□□ -1.83
MSH1P25846 YDR461C-AYDR461C-A 243 nt3.59□□□□□ -1.83
MSH1P25846 BCD1YHR040W 1101 nt3.59□□□□□ -1.83
MSH1P25846 RPL17AYKL180W 555 nt3.59□□□□□ -1.83
MSH1P25846 RPL15AYLR029C 615 nt3.59□□□□□ -1.83
MSH1P25846 RPL13BYMR142C 600 nt3.59□□□□□ -1.83
MSH1P25846 PAI3YMR174C 207 nt3.59□□□□□ -1.83
MSH1P25846 21S_rRNA21S_rRNA 3296 nt3.59□□□□□ -1.84
MSH1P25846 RED1YLR263W 2484 nt3.59□□□□□ -1.84
MSH1P25846 LRG1YDL240W 3054 nt3.58□□□□□ -1.84
MSH1P25846 VBA4YDR119W 2307 nt3.58□□□□□ -1.84
MSH1P25846 PBP4YDL053C 558 nt3.58□□□□□ -1.84
MSH1P25846 YDR431WYDR431W 312 nt3.58□□□□□ -1.84
MSH1P25846 AIM11YER093C-A 414 nt3.58□□□□□ -1.84
MSH1P25846 DLS1YJL065C 504 nt3.58□□□□□ -1.84
MSH1P25846 YLL044WYLL044W 447 nt3.58□□□□□ -1.84
MSH1P25846 IRC21YMR073C 606 nt3.58□□□□□ -1.84
MSH1P25846 TUM1YOR251C 915 nt3.58□□□□□ -1.84
MSH1P25846 YBR137WYBR137W 540 nt3.58□□□□□ -1.84
MSH1P25846 SHG1YBR258C 429 nt3.58□□□□□ -1.84
MSH1P25846 YTA7YGR270W 4140 nt3.58□□□□□ -1.84
MSH1P25846 YKL075CYKL075C 1353 nt3.58□□□□□ -1.84
MSH1P25846 MRS2YOR334W 1413 nt3.58□□□□□ -1.84
MSH1P25846 SSE2YBR169C 2082 nt3.58□□□□□ -1.84
MSH1P25846 RSF2YJR127C 4143 nt3.57□□□□□ -1.84
MSH1P25846 MPS1YDL028C 2295 nt3.57□□□□□ -1.84
MSH1P25846 YDR061WYDR061W 1620 nt3.57□□□□□ -1.84
MSH1P25846 YFR054CYFR054C 579 nt3.57□□□□□ -1.84
MSH1P25846 RPS23AYGR118W 438 nt3.57□□□□□ -1.84
MSH1P25846 YIL046W-AYIL046W-A 165 nt3.57□□□□□ -1.84
MSH1P25846 VPS53YJL029C 2469 nt3.57□□□□□ -1.84
MSH1P25846 TMA19YKL056C 504 nt3.57□□□□□ -1.84
MSH1P25846 MRP8YKL142W 660 nt3.57□□□□□ -1.84
MSH1P25846 ATX1YNL259C 222 nt3.57□□□□□ -1.84
MSH1P25846 RPS23BYPR132W 438 nt3.57□□□□□ -1.84
MSH1P25846 TIF4631YGR162W 2859 nt3.57□□□□□ -1.84
MSH1P25846 FRE8YLR047C 2061 nt3.56□□□□□ -1.84
MSH1P25846 CIK1YMR198W 1785 nt3.56□□□□□ -1.84
MSH1P25846 PEX1YKL197C 3132 nt3.56□□□□□ -1.84
MSH1P25846 AUS1YOR011W 4185 nt3.56□□□□□ -1.84
MSH1P25846 YDR262WYDR262W 819 nt3.56□□□□□ -1.84
MSH1P25846 NTF2YER009W 378 nt3.56□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms