Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
XPAP23025 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
XPAP23025 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.14■□□□□ 0.97
XPAP23025 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.14■□□□□ 0.97
XPAP23025 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.14■□□□□ 0.97
XPAP23025 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.14■□□□□ 0.97
XPAP23025 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
XPAP23025 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.14■□□□□ 0.97
XPAP23025 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.14■□□□□ 0.97
XPAP23025 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.14■□□□□ 0.97
XPAP23025 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.14■□□□□ 0.97
XPAP23025 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
XPAP23025 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
XPAP23025 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
XPAP23025 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
XPAP23025 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.14■□□□□ 0.97
XPAP23025 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
XPAP23025 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
XPAP23025 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
XPAP23025 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.13■□□□□ 0.97
XPAP23025 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
XPAP23025 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
XPAP23025 CDCA4P2-201ENST00000441182 718 ntBASIC21.13■□□□□ 0.97
XPAP23025 SLC7A5P1-201ENST00000568957 537 ntBASIC21.13■□□□□ 0.97
XPAP23025 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
XPAP23025 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.13■□□□□ 0.97
XPAP23025 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.13■□□□□ 0.97
XPAP23025 AC010536.3-201ENST00000620306 533 ntBASIC21.13■□□□□ 0.97
XPAP23025 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
XPAP23025 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
XPAP23025 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
XPAP23025 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
XPAP23025 AC061975.6-201ENST00000579045 1553 ntBASIC21.13■□□□□ 0.97
XPAP23025 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.13■□□□□ 0.97
XPAP23025 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
XPAP23025 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
XPAP23025 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
XPAP23025 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XPAP23025 KRT16P2-201ENST00000414673 1423 ntBASIC21.12■□□□□ 0.97
XPAP23025 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.12■□□□□ 0.97
XPAP23025 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XPAP23025 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XPAP23025 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.12■□□□□ 0.97
XPAP23025 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XPAP23025 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
XPAP23025 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
XPAP23025 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.12■□□□□ 0.97
XPAP23025 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.12■□□□□ 0.97
XPAP23025 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XPAP23025 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.12■□□□□ 0.97
XPAP23025 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.12■□□□□ 0.97
XPAP23025 AC231657.2-201ENST00000624556 255 ntBASIC21.12■□□□□ 0.97
XPAP23025 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.12■□□□□ 0.97
XPAP23025 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
XPAP23025 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
XPAP23025 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XPAP23025 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XPAP23025 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XPAP23025 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.12■□□□□ 0.97
XPAP23025 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.12■□□□□ 0.97
XPAP23025 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XPAP23025 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XPAP23025 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
XPAP23025 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XPAP23025 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.11■□□□□ 0.97
XPAP23025 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.11■□□□□ 0.97
XPAP23025 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XPAP23025 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
XPAP23025 AC007322.1-201ENST00000426983 750 ntBASIC21.11■□□□□ 0.97
XPAP23025 AC006970.2-201ENST00000450065 779 ntBASIC21.11■□□□□ 0.97
XPAP23025 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XPAP23025 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.11■□□□□ 0.97
XPAP23025 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XPAP23025 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.11■□□□□ 0.97
XPAP23025 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XPAP23025 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
XPAP23025 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.11■□□□□ 0.97
XPAP23025 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
XPAP23025 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
XPAP23025 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
XPAP23025 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XPAP23025 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.1■□□□□ 0.97
XPAP23025 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.1■□□□□ 0.97
XPAP23025 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
XPAP23025 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.1■□□□□ 0.97
XPAP23025 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
XPAP23025 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.1■□□□□ 0.97
XPAP23025 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.1■□□□□ 0.97
XPAP23025 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.1■□□□□ 0.97
XPAP23025 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.1■□□□□ 0.97
XPAP23025 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XPAP23025 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XPAP23025 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XPAP23025 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
XPAP23025 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
XPAP23025 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XPAP23025 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XPAP23025 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.09■□□□□ 0.97
XPAP23025 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
XPAP23025 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms