Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 POU5F1P4-201ENST00000413175 1085 ntBASIC21.16■□□□□ 0.98
HLA-DPA1P20036 DUX4L2-201ENST00000561772 1275 ntBASIC21.16■□□□□ 0.98
HLA-DPA1P20036 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 DUX4L6-201ENST00000626483 1275 ntBASIC21.16■□□□□ 0.98
HLA-DPA1P20036 DUX4L1-201ENST00000627662 1275 ntBASIC21.16■□□□□ 0.98
HLA-DPA1P20036 DUX4L8-201ENST00000629013 1275 ntBASIC21.16■□□□□ 0.98
HLA-DPA1P20036 DUX4L3-201ENST00000630187 1275 ntBASIC21.16■□□□□ 0.98
HLA-DPA1P20036 DUX4L7-201ENST00000630678 1275 ntBASIC21.16■□□□□ 0.98
HLA-DPA1P20036 DUX4L5-201ENST00000630834 1275 ntBASIC21.16■□□□□ 0.98
HLA-DPA1P20036 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DPA1P20036 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 AC010141.2-201ENST00000452426 721 ntBASIC21.15■□□□□ 0.98
HLA-DPA1P20036 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 AC104187.1-201ENST00000607510 612 ntBASIC21.15■□□□□ 0.98
HLA-DPA1P20036 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DPA1P20036 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.14■□□□□ 0.98
HLA-DPA1P20036 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-DPA1P20036 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-DPA1P20036 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
HLA-DPA1P20036 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
HLA-DPA1P20036 AP004607.4-201ENST00000530158 1459 ntBASIC21.14■□□□□ 0.98
HLA-DPA1P20036 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-DPA1P20036 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DPA1P20036 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DPA1P20036 AC034268.1-201ENST00000441047 882 ntBASIC21.14■□□□□ 0.97
HLA-DPA1P20036 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.14■□□□□ 0.97
HLA-DPA1P20036 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DPA1P20036 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.14■□□□□ 0.97
HLA-DPA1P20036 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 AC004854.2-201ENST00000608450 1441 ntBASIC21.13■□□□□ 0.97
HLA-DPA1P20036 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 AC026271.2-201ENST00000428091 497 ntBASIC21.13■□□□□ 0.97
HLA-DPA1P20036 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DPA1P20036 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 AC061975.6-201ENST00000579045 1553 ntBASIC21.12■□□□□ 0.97
HLA-DPA1P20036 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DPA1P20036 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 AP001160.3-201ENST00000601484 763 ntBASIC21.11■□□□□ 0.97
HLA-DPA1P20036 AC087623.3-201ENST00000607047 1098 ntBASIC21.11■□□□□ 0.97
HLA-DPA1P20036 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DPA1P20036 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms