Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL11A2P13942 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
COL11A2P13942 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL11A2P13942 AC012618.2-201ENST00000428058 849 ntBASIC25.97■■□□□ 1.75
COL11A2P13942 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC25.97■■□□□ 1.75
COL11A2P13942 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL11A2P13942 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.97■■□□□ 1.75
COL11A2P13942 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.97■■□□□ 1.75
COL11A2P13942 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.97■■□□□ 1.75
COL11A2P13942 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.97■■□□□ 1.75
COL11A2P13942 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL11A2P13942 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL11A2P13942 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
COL11A2P13942 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL11A2P13942 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL11A2P13942 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.97■■□□□ 1.75
COL11A2P13942 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.97■■□□□ 1.75
COL11A2P13942 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL11A2P13942 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.96■■□□□ 1.75
COL11A2P13942 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL11A2P13942 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL11A2P13942 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL11A2P13942 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
COL11A2P13942 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.96■■□□□ 1.75
COL11A2P13942 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.96■■□□□ 1.75
COL11A2P13942 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC25.96■■□□□ 1.75
COL11A2P13942 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.96■■□□□ 1.75
COL11A2P13942 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL11A2P13942 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL11A2P13942 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
COL11A2P13942 MCRIP2P1-201ENST00000394346 511 ntBASIC25.95■■□□□ 1.74
COL11A2P13942 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.95■■□□□ 1.74
COL11A2P13942 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.95■■□□□ 1.74
COL11A2P13942 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.95■■□□□ 1.74
COL11A2P13942 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL11A2P13942 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
COL11A2P13942 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
COL11A2P13942 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.95■■□□□ 1.74
COL11A2P13942 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL11A2P13942 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL11A2P13942 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
COL11A2P13942 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.94■■□□□ 1.74
COL11A2P13942 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.94■■□□□ 1.74
COL11A2P13942 Z99916.2-201ENST00000604037 246 ntBASIC25.94■■□□□ 1.74
COL11A2P13942 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
COL11A2P13942 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL11A2P13942 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL11A2P13942 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL11A2P13942 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL11A2P13942 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
COL11A2P13942 C11orf96-202ENST00000528572 1834 ntBASIC25.93■■□□□ 1.74
COL11A2P13942 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL11A2P13942 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL11A2P13942 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL11A2P13942 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
COL11A2P13942 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL11A2P13942 AC245052.3-201ENST00000450182 901 ntBASIC25.93■■□□□ 1.74
COL11A2P13942 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.93■■□□□ 1.74
COL11A2P13942 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.93■■□□□ 1.74
COL11A2P13942 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL11A2P13942 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.92■■□□□ 1.74
COL11A2P13942 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL11A2P13942 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL11A2P13942 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL11A2P13942 KRT17P3-201ENST00000420566 1262 ntBASIC25.92■■□□□ 1.74
COL11A2P13942 AC105020.6-201ENST00000621523 1217 ntBASIC25.92■■□□□ 1.74
COL11A2P13942 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.92■■□□□ 1.74
COL11A2P13942 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.92■■□□□ 1.74
COL11A2P13942 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.92■■□□□ 1.74
COL11A2P13942 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL11A2P13942 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
COL11A2P13942 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.92■■□□□ 1.74
COL11A2P13942 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
COL11A2P13942 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.91■■□□□ 1.74
COL11A2P13942 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.91■■□□□ 1.74
COL11A2P13942 AL589743.5-201ENST00000616611 1050 ntBASIC25.91■■□□□ 1.74
COL11A2P13942 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.91■■□□□ 1.74
COL11A2P13942 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL11A2P13942 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.91■■□□□ 1.74
COL11A2P13942 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
COL11A2P13942 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL11A2P13942 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.91■■□□□ 1.74
COL11A2P13942 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL11A2P13942 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.91■■□□□ 1.74
COL11A2P13942 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL11A2P13942 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL11A2P13942 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL11A2P13942 POM121L13P-201ENST00000422362 380 ntBASIC25.91■■□□□ 1.74
COL11A2P13942 AC007322.3-201ENST00000426526 701 ntBASIC25.91■■□□□ 1.74
COL11A2P13942 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.91■■□□□ 1.74
COL11A2P13942 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL11A2P13942 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL11A2P13942 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.91■■□□□ 1.74
COL11A2P13942 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.91■■□□□ 1.74
COL11A2P13942 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.91■■□□□ 1.74
COL11A2P13942 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL11A2P13942 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL11A2P13942 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL11A2P13942 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
COL11A2P13942 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms