Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.9■□□□□ 0.78
CCL4P13236 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.9■□□□□ 0.78
CCL4P13236 KRT17P1-201ENST00000399211 1546 ntBASIC19.9■□□□□ 0.78
CCL4P13236 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL4P13236 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCL4P13236 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL4P13236 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL4P13236 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL4P13236 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL4P13236 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCL4P13236 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL4P13236 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL4P13236 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.89■□□□□ 0.77
CCL4P13236 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.89■□□□□ 0.77
CCL4P13236 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL4P13236 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.89■□□□□ 0.77
CCL4P13236 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.89■□□□□ 0.77
CCL4P13236 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL4P13236 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.89■□□□□ 0.77
CCL4P13236 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.89■□□□□ 0.77
CCL4P13236 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.89■□□□□ 0.77
CCL4P13236 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.89■□□□□ 0.77
CCL4P13236 AC006058.3-201ENST00000606217 1069 ntBASIC19.89■□□□□ 0.77
CCL4P13236 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.89■□□□□ 0.77
CCL4P13236 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCL4P13236 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCL4P13236 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCL4P13236 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL4P13236 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.88■□□□□ 0.77
CCL4P13236 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL4P13236 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL4P13236 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL4P13236 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL4P13236 AC245052.3-201ENST00000450182 901 ntBASIC19.88■□□□□ 0.77
CCL4P13236 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.88■□□□□ 0.77
CCL4P13236 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCL4P13236 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.88■□□□□ 0.77
CCL4P13236 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL4P13236 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCL4P13236 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CCL4P13236 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.87■□□□□ 0.77
CCL4P13236 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCL4P13236 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCL4P13236 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.87■□□□□ 0.77
CCL4P13236 AC128676.1-201ENST00000454392 318 ntBASIC19.87■□□□□ 0.77
CCL4P13236 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.87■□□□□ 0.77
CCL4P13236 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.87■□□□□ 0.77
CCL4P13236 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CCL4P13236 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.87■□□□□ 0.77
CCL4P13236 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCL4P13236 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.87■□□□□ 0.77
CCL4P13236 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CCL4P13236 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.86■□□□□ 0.77
CCL4P13236 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCL4P13236 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCL4P13236 AC127496.7-201ENST00000625110 1798 ntBASIC19.86■□□□□ 0.77
CCL4P13236 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.86■□□□□ 0.77
CCL4P13236 GCSHP5-201ENST00000443090 522 ntBASIC19.86■□□□□ 0.77
CCL4P13236 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.86■□□□□ 0.77
CCL4P13236 FAM21FP-204ENST00000608637 956 ntBASIC19.86■□□□□ 0.77
CCL4P13236 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CCL4P13236 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCL4P13236 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.86■□□□□ 0.77
CCL4P13236 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
CCL4P13236 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.85■□□□□ 0.77
CCL4P13236 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL4P13236 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL4P13236 AL158047.1-201ENST00000445918 881 ntBASIC19.85■□□□□ 0.77
CCL4P13236 CDV3P1-201ENST00000471403 739 ntBASIC19.85■□□□□ 0.77
CCL4P13236 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCL4P13236 UNC93B5-201ENST00000530315 699 ntBASIC19.85■□□□□ 0.77
CCL4P13236 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.85■□□□□ 0.77
CCL4P13236 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCL4P13236 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
CCL4P13236 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.85■□□□□ 0.77
CCL4P13236 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL4P13236 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL4P13236 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCL4P13236 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CCL4P13236 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.85■□□□□ 0.77
CCL4P13236 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCL4P13236 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL4P13236 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.84■□□□□ 0.77
CCL4P13236 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCL4P13236 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
CCL4P13236 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCL4P13236 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCL4P13236 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.84■□□□□ 0.77
CCL4P13236 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.84■□□□□ 0.77
CCL4P13236 CYP2T3P-201ENST00000601990 817 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms